Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0863 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCCTTTCAAGCTGATGGAAAGTCTATCAGGCATGCGTCATCTGAATTGACTACAGATATTGTCATAAATGTTGGCGAAGTCAAGTTTTACCTCCACAAGTTTCCTTTACTGTGCAAGAGCAATCGATTACAAAAGCTAGTGTCAAAAGCTAATGAAGGGGATTCTGACGAAATTTTCTTGAATGAGCTCCCTGGAGGGGCCAAGGCATTTGAATTATGTGCAAAATTCTGCTATGGGATGACTGTTACTCTTGGTGCTCACAACATTGTGGCTGCTCGCTGTGCAGCTGAGTATCTTGAAATGACTGAGGATATTGATAAAGGAAACTTAATTTTTAAAATTGAGGTATTTCTTAATTCAAGCATCTTGCGGAGCTGGAAAGATTCCATAATTGTTCTACAAACTACTAAATCTTTTCTCCCATGGTCTGAGGATTTGAACATCATTGGCAGATGTATAGATTCTATAGCTTCTAAAACTTCTGTGGACCCACCTAACATCACATGGTCCTACACATATAACCGGAAACTGACAGAGCCTGATAGAATTACTGAGCACACGATGAAATATGAAGAGAAAGTGGAGTTTGTTCCTAAGGATTGGTGGGTTGAAGATATTTGTGAGCTGGACATTGATATTTACAAACGAGTAATGATTACTGTGAAGTCGAAGGGAAGAATGGATGGTACTGTGATTGGGGAGGCACTGAAAACGTATGCAATTAGGTGGTTGCCTGATTCCATTGAGGCATTGGTTTCTGAAGCTCATGGACGGAGAAACAAATTTCTGGTGGAAACGATTGTCTGTCTATTGCCACCTGACAATGCCATGTGTTCTTGTAGTTTCCTTCTGCAACTATTGAAAGTGGCCATCCTAGTAGGTGTAGATGAGTCGGCAAAAGAGGAATTAATGAAAAGCACCTGCCTTAAATTGCATGAAGCTTCCATTAAAGATCTACTGATCCCTGCAAGGCCTCCTCAGACTACCATATATGATGTTCAGTTGGTACAATGTCTCTTGAATCGATATATGAATGAAAAGGGCATCAGCTGCAATATGGAAGTTTTGGAGAAGAAAGATAAAGCTAGTTTAGCACACATGTTCCTCGTGAATGTTGGCCAATTGGTGGACAATTTTCTTGCTGAAATTGCACTTGATCCGAATCTCAGCCTTTCTAGTTTTATCGACTTGTCACAAACAGTTCCAGTATTTGCTAGACCCAATCATGATGGTCTTTACGGAGCCATTGACATGTACTTGAAGGAGCACCCAAGTATGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTGATGGATGTCAAGAGACTGTCTGTGGATGCATCTATGCATGCTGCACAGAATGAGCGGCTTCCACTTCGGGTTATAGTGCAGGTTCTCTTTTTTGAGCAGATCAGGGCTTCAGCCAGCGTCCAAGCTCTTGGTAATGAGAATTCACGTAAGCCTTTGTACACAGTGAGCACGGATGAAGAATGTGAGAAAACAGTTGGCGAGAAGTGCCAATCCCTTGAGAGCCAGATGTGTGATTTGAAGATCAAGGAAGAAGAATTTCCCAAGAATGGGAAACTGAACAAGAATAATAGCAAAAGCAGCAGAAGTGGAATGCAATTACTTCATTCACGTTCAAGGAGAATCTTTGACAAGTTATGGATTGGTGGTAAAGGACAGGGAGAGAGCAGGAGCTCAGAGACATCGGGAAGTTCAAATAGCCCAACATCTATTGTCCCAGGATACACCAAATCATCTGGTTCATCTTCTAGACACAGAAGGCATTCTGTTTCGTAA 1836 0.4161 MKFMKLGSKPDAFQADGKSIRHASSELTTDIVINVGEVKFYLHKFPLLCKSNRLQKLVSKANEGDSDEIFLNELPGGAKAFELCAKFCYGMTVTLGAHNIVAARCAAEYLEMTEDIDKGNLIFKIEVFLNSSILRSWKDSIIVLQTTKSFLPWSEDLNIIGRCIDSIASKTSVDPPNITWSYTYNRKLTEPDRITEHTMKYEEKVEFVPKDWWVEDICELDIDIYKRVMITVKSKGRMDGTVIGEALKTYAIRWLPDSIEALVSEAHGRRNKFLVETIVCLLPPDNAMCSCSFLLQLLKVAILVGVDESAKEELMKSTCLKLHEASIKDLLIPARPPQTTIYDVQLVQCLLNRYMNEKGISCNMEVLEKKDKASLAHMFLVNVGQLVDNFLAEIALDPNLSLSSFIDLSQTVPVFARPNHDGLYGAIDMYLKEHPSMTKAERKKLCGLMDVKRLSVDASMHAAQNERLPLRVIVQVLFFEQIRASASVQALGNENSRKPLYTVSTDEECEKTVGEKCQSLESQMCDLKIKEEEFPKNGKLNKNNSKSSRSGMQLLHSRSRRIFDKLWIGGKGQGESRSSETSGSSNSPTSIVPGYTKSSGSSSRHRRHSVS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0863 611 Gene3D Potassium Channel Kv1.1; Chain A 9 119 IPR011333 -
Alju08g0863 611 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Alju08g0863 611 MobiDBLite consensus disorder prediction 574 600 - -
Alju08g0863 611 MobiDBLite consensus disorder prediction 536 555 - -
Alju08g0863 611 Pfam BTB/POZ domain 25 117 IPR000210 GO:0005515
Alju08g0863 611 Pfam NPH3 family 211 459 IPR027356 -
Alju08g0863 611 MobiDBLite consensus disorder prediction 540 555 - -
Alju08g0863 611 PANTHER OS12G0117600 PROTEIN 25 553 IPR043454 -
Alju08g0863 611 SUPERFAMILY POZ domain 24 115 IPR011333 -
Alju08g0863 611 MobiDBLite consensus disorder prediction 566 611 - -
Alju08g0863 611 ProSiteProfiles NPH3 domain profile. 211 483 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0863 Alju-ChrAlju08 6562220 6565680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0863 27 482 EF-hand Containing Proteins AT3G44820 34.560 2.77e-91 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2145 07 47553425 47556904 Alju08g0863 08 6562220 6565680 CCT