Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2145 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAAATCTATCATCAGGTATGTGTCACCCGATCTGGCCACTGATGTCATCATTAATGTGGGTGAAGTGAAGTTTTACCTTCACAAGTTCCCTCTCCTGTCCAAGAGTAATAGACTCCAGAAGCTGGTATCAAAGGCAAACGAAGAGAATTCTGATGAAATACACATAGCTGATTTCCCTGGAGGGCCTAAAGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATAACCGTTACGCTTAATGCGTACAACGTCGTGGCTGCCCGTTGTGCAGCAGAGTACCTTGAGATGACTGAGGACACCGACAAAGGGAACTTAATTTTCAAGATTGAGGTGTTCCTAAACTCGAGTATCTTCCGGAGCTGGAAGGATTCTATCATTGTTCTTCAGACTACTAAATCTCTTCTGCCATGGTCTGAGGATCTGAAGATCATTGGAAGATGCATAGACTCCATAGCTTCAAAAACTTCTGTGAACCCAGAACACATCATGTGGTCCTACACATATAACCGGAAACTAAGTGAGCCTGATAAAATTACTGAGGACCAGATAGCAACTAAGGAGAAAATCGAGTCGGTTCCTAAGGATTGGTGGGTCGAAGATGTATGCGAGCTGGACATTGATCTTTACAAACGAGTAATGATTGCTGTAAAATCAAAGGGAAGAATGGATGGTGTCATAATTGGAGAGGCTCTAAAGGTCTATGCAGTGAGATGGTTGCCTGAATCTGTTGAGGCATTAGCTTCTGATGCTCATGCTCGGAGGAACAAAACCTTGGTAGAAACAATTGTCTGTTTATTGCCGTCTGACTATGGTGGAGGCTGTTCATGTAGCTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTTGGAGCAGACGAGTCGTCAAGAGAAGAATTAATGAAGAGCATTAGCTTCAGATTGCATGAAGCTTCTGTTAAAGACCTGTTGATCCCTGCAAGGCCTCCTCAGACAACCATATATGATGTTCAATTAGTACAATGTCTTTTGAATGGATGGATGACTTTTGTAAAGGAAAGTTGTGATATGGAAGTTGATGAGTATGGAGACAAAGGAAAAAGCATATTGAACATCGGCAAATTGGTGGATGGCTACCTAGCAGAAATTGCACATGATTCAAATCTCAGCGTGTCTAGTTTCATTGAATTGTCAGAGTCAGTTCCAGAGTTTGCTCGACCAAAGCACGATGGCCTCTACAGAGCAATTGACATTTACTTGAAGGAGCACCCGAGCCTAACAAAAGCAGAAAGGAAGCAGATATGTGGTTTGATGGATGTGAAGAAGTTGACGGAGGAAGCATCGATGCATGCTGCACAGAACGACCGGCTTCCACTTCGAGTTGTAGTGCAGGTTCTCTTCTATGAGCAGCTTAGAGCTTCTGCCAATGTTCGAGCTCTCGGTGGCAATCAATGTGACGAGGATTATGAGAAAACAGCAGGGGAGAATTGTGAGTCATTCAAAGATCAGATGAGCCATTTGAGCATCAAAGATGAAGAAGAGTTCAGTAAGAAAGGGAAACTGAACAAGAAGAATAGCAAAAGCAGTAAAAGTGGCATGCAACTCCTACCATCTCGGTCGAGGAGAATCTTTGATAAGTTGTGGATTGTGGGGAAAGGACAGGGAGAGAATAGGAGCTCTGAGACTTCAGGGAGTTCTAATAGCCCAACATCAGTAGTCCCTGTAGATACCAAATCATCTGGTTCTTCCTCAAGACAAAGGAGGCATTCTGTCTCATAG 1806 0.4319 MKFMKLGSKPDALQADGKSIIRYVSPDLATDVIINVGEVKFYLHKFPLLSKSNRLQKLVSKANEENSDEIHIADFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDTDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCIDSIASKTSVNPEHIMWSYTYNRKLSEPDKITEDQIATKEKIESVPKDWWVEDVCELDIDLYKRVMIAVKSKGRMDGVIIGEALKVYAVRWLPESVEALASDAHARRNKTLVETIVCLLPSDYGGGCSCSFLLKLLKVAILVGADESSREELMKSISFRLHEASVKDLLIPARPPQTTIYDVQLVQCLLNGWMTFVKESCDMEVDEYGDKGKSILNIGKLVDGYLAEIAHDSNLSVSSFIELSESVPEFARPKHDGLYRAIDIYLKEHPSLTKAERKQICGLMDVKKLTEEASMHAAQNDRLPLRVVVQVLFYEQLRASANVRALGGNQCDEDYEKTAGENCESFKDQMSHLSIKDEEEFSKKGKLNKKNSKSSKSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPVDTKSSGSSSRQRRHSVS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2145 601 SMART BTB_4 30 128 IPR000210 GO:0005515
Alju07g2145 601 Pfam BTB/POZ domain 29 117 IPR000210 GO:0005515
Alju07g2145 601 MobiDBLite consensus disorder prediction 517 545 - -
Alju07g2145 601 ProSiteProfiles NPH3 domain profile. 212 481 IPR027356 -
Alju07g2145 601 MobiDBLite consensus disorder prediction 564 601 - -
Alju07g2145 601 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Alju07g2145 601 PANTHER OS12G0117600 PROTEIN 26 563 IPR043454 -
Alju07g2145 601 CDD BTB_POZ_NPY3-like 22 125 - -
Alju07g2145 601 Pfam NPH3 family 212 457 IPR027356 -
Alju07g2145 601 Gene3D Potassium Channel Kv1.1; Chain A 17 121 IPR011333 -
Alju07g2145 601 SUPERFAMILY POZ domain 22 115 IPR011333 -
Alju07g2145 601 MobiDBLite consensus disorder prediction 562 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2145 Alju-ChrAlju07 47553425 47556904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2145 28 480 EF-hand Containing Proteins AT3G44820 34.631 3.03e-93 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2145 07 47553425 47556904 Alju08g0863 08 6562220 6565680 CCT
Alju07g2145 07 47553425 47556904 Alju07g2145 07 47553425 47556904 ECH