Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0811 ATGACAATTGGTGGCGGTATTCCTAATCTCGTGTATACGATGGAATTGAGGTATGATTTTCCCTACAACTTGCATCCTCACCATTCTGCCTTTATAAACCCATCCATCTTCTTCCCCCTTCACTGCATTTCACTACTCTCAGCCATGGCTTCTTCCACCACCAAGCTCTGTGCAACCATTTTGGTGCTTTACCTTCTTGCTTGCTCGACCTTCACGGAAGCCTGCGGGTCATGCAAGCCTCAGCCCAAGCCCTGCCCGACCCCCGCCAAGTGTACCCTGGACACACTGAAGCTAGGAGTATGTGCTGACGTCCTGGGCCTTGTAAACGTCGTCGTCGGGTCTCCTCCGACCAGAAATTGTTGCCCATTGCTGCAAGGTTTGGCTGATTTAGAGGCAGCTCTCTGCCTCTGCACTGCCATTAAGGCCAACGTTCTTGGTATCAACTTGAACGTACCTCTCAGCCTCAGCTTGATCCTTAGCTCTTGTCAAAAATCTGTTCCTTCTGGTTTTCAATGTCCCTAG 522 0.5038 MTIGGGIPNLVYTMELRYDFPYNLHPHHSAFINPSIFFPLHCISLLSAMASSTTKLCATILVLYLLACSTFTEACGSCKPQPKPCPTPAKCTLDTLKLGVCADVLGLVNVVVGSPPTRNCCPLLQGLADLEAALCLCTAIKANVLGINLNVPLSLSLILSSCQKSVPSGFQCP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0811 173 FunFam pEARLI1-like lipid transfer protein 1 89 173 - -
Alju08g0811 173 Pfam Hydrophobic seed protein 91 173 IPR027923 -
Alju08g0811 173 CDD HPS_like 88 172 IPR027923 -
Alju08g0811 173 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 94 173 IPR036312 -
Alju08g0811 173 SMART aai_6 91 172 IPR016140 -
Alju08g0811 173 Gene3D - 89 173 IPR036312 -
Alju08g0811 173 PANTHER - 57 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0811 Alju-ChrAlju08 6126577 6129500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0811 82 173 Acyl Lipid Metabolism Gene Families AT4G22490 39.130 3.74e-15 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2203 07 48080605 48081015 Alju08g0811 08 6126577 6129500 CCT
Alju08g0811 08 6126577 6129500 Alju08g0811 08 6126577 6129500 ECH