Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2203 ATGGCTTCCCACAAGCTCTGTGCAATCATCTTCGTCCTCTCTCTCCTTGCCCACTCAACACTCATCACTGCCCACCACCCCAAACCACCATGTCCCCCGACAGTGACCCCGCCGACCCCGAAGCCCACTCCCACACCACCGACGCCGGCGACGGACAAATGCCCGAAGGACACGCTGAAGCTGTCGTTGTGTGCGGATGTTCTGGGGCTTGTTAACGTTGTTATCGGAACTCCATTGTCGGCTAAGTGTTGTGCATTGTTGGATGGATTGGTGGATTTGGAGGCAGCACTTTGTCTGTGCACAGCGATTAAGGCCAACTTGCTTGGAATCAACCTTAATATCCCCGTCGCTCTCAGCTTAATCCTTAGTGCATGTCAGAAGACAGTTCCTCCTGGTTTCCAGTGTCCTTAG 411 0.5401 MASHKLCAIIFVLSLLAHSTLITAHHPKPPCPPTVTPPTPKPTPTPPTPATDKCPKDTLKLSLCADVLGLVNVVIGTPLSAKCCALLDGLVDLEAALCLCTAIKANLLGINLNIPVALSLILSACQKTVPPGFQCP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2203 136 PANTHER - 7 135 - -
Alju07g2203 136 Gene3D - 52 136 IPR036312 -
Alju07g2203 136 CDD HPS_like 51 135 IPR027923 -
Alju07g2203 136 MobiDBLite consensus disorder prediction 29 52 - -
Alju07g2203 136 Pfam Hydrophobic seed protein 54 136 IPR027923 -
Alju07g2203 136 SMART aai_6 54 135 IPR016140 -
Alju07g2203 136 MobiDBLite consensus disorder prediction 29 51 - -
Alju07g2203 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 136 IPR036312 -
Alju07g2203 136 FunFam pEARLI1-like lipid transfer protein 1 52 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2203 Alju-ChrAlju07 48080605 48081015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2203 47 136 Acyl Lipid Metabolism Gene Families AT4G22490 40.000 6.32e-18 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2203 07 48080605 48081015 Alju08g0811 08 6126577 6129500 CCT
Alju07g2203 07 48080605 48081015 Alju07g2203 07 48080605 48081015 ECH