Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2734 ATGCGTGGCTTCCTCCCTCCTCCATCCTCTTCCCTATTTAGGGGCCTTCTTTGGTTCCTTTCTTCCTCCTTCCACACTCTTCACTTTTGCCCACATACACCATACTCCTCTCAATACAAGCCCCTCTTGCGTATTTGTCCCAGTTCAAGTCGAAACAAGGAAGTGAGGAGATTGAAGGACGGTGTGGTTCGGACCGGGAAAGAAATGGTGGGAAGGGAGAAGTTGAGGACGGAGGACTTGAACTCGTGCTTTGAGAAGCTGATGATGGTTGCCGGCGGCGATAAAGGTGGCAAAGGATTGAAAATGGAGGGTGGGTCGAATTCAGAATGGAAAGATATTCCAGTGGAACTTTTGATGCAAATACTGGGCCTTGGGGATGATCAGACGGTGATCGCAGCTTCTGGTGTATGTCGTGGGTGGAGAGAAGCTATTTGCTTTGGCCTTACGCGTTTATCACTCTCATGGTGCAGCAAGAACATGAATAATTTGGTGCTATTTCTTGCTCCTAAGTTCACAAAATTGCAAACTCTAATCCTTCGTCAAGAGAAGCCCCAGCTAGAGGATACTGCTGTTGAGACCATTGCAAATTGCTGTCGTGGCCTGCAGATCCTGGACCTGAGCAAAAGTTTCAAGCTGACCGATCGTTCGCTGTATTCCTTAGCCCGTGGTTGCCCCGATCTCACAAAACTGAATATCAGTGGGTGTTCAGCATTTAGTGACATTGCTCTGGGTTACCTTGCCAGTTTCTGCAGAAAATTGAGAGTCCTAAATCTCTGTGGATGTGTGAAAGCTGCATCTGACACCGCATTGCAGGCAATTGGACGCTACTGCAATGAGTTGCAGTCCTTGAACCTAGGATGGTGCGAAAAAGTGGGTGATGTTGGAGTGATGAGTTTAGCCCACGGGTGCCCTGATCTTAGGACACTGGACCTGTGTGGTTGTATCTGTATAACAGATGATAGTGTGGTTGCACTGGCAAACAGGTGCCCTCATCTGAGGTCTCTGGGGCTGTACTACTGCCAAAACATCACAGACAGGTCGATGCATTCGTTGGCAGAGAGCAAAGTGAAGCACAGGGCGTGGAGATCTGTGAAAGGAGGGGGGAACGAGGAGGATGGGCTGAGGACTCTGAACATAAGCCAGTGCACAGCACTCACACCCTCGGCGGTTCAGGCGGTGTGCGACTCCTTCCCGGCTCTGCACACATGCTCCGGCAGGCACTCCCTCATCATGAGTGGCTGTCTCAGCTTGATGTCCGTGCACTGTGCTTGTGCCTGTGCCGGCCATCCACCCCAATAA 1299 0.5065 MRGFLPPPSSSLFRGLLWFLSSSFHTLHFCPHTPYSSQYKPLLRICPSSSRNKEVRRLKDGVVRTGKEMVGREKLRTEDLNSCFEKLMMVAGGDKGGKGLKMEGGSNSEWKDIPVELLMQILGLGDDQTVIAASGVCRGWREAICFGLTRLSLSWCSKNMNNLVLFLAPKFTKLQTLILRQEKPQLEDTAVETIANCCRGLQILDLSKSFKLTDRSLYSLARGCPDLTKLNISGCSAFSDIALGYLASFCRKLRVLNLCGCVKAASDTALQAIGRYCNELQSLNLGWCEKVGDVGVMSLAHGCPDLRTLDLCGCICITDDSVVALANRCPHLRSLGLYYCQNITDRSMHSLAESKVKHRAWRSVKGGGNEEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLSLMSVHCACACAGHPPQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2734 432 Gene3D Ribonuclease Inhibitor 135 372 IPR032675 -
Alju07g2734 432 FunFam F-box protein SKP2B 145 363 - -
Alju07g2734 432 Pfam Leucine Rich repeat 277 300 IPR001611 GO:0005515
Alju07g2734 432 PANTHER UNCHARACTERIZED 125 404 - -
Alju07g2734 432 SUPERFAMILY RNI-like 145 352 - -
Alju07g2734 432 SMART LRR_CC_2 198 223 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 329 354 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 145 170 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 224 249 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 277 302 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 250 276 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 303 328 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 171 197 IPR006553 -
Alju07g2734 432 SMART LRR_CC_2 371 396 IPR006553 -
Alju07g2734 432 Pfam F-box-like 111 144 IPR001810 GO:0005515
Alju07g2734 432 SUPERFAMILY F-box domain 101 145 IPR036047 GO:0005515
Alju07g2734 432 CDD F-box_AtSKP2-like 109 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2734 Alju-ChrAlju07 52821481 52824149 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2734 07 52821481 52824149 Alju08g0313 08 2282324 2286217 CCT
Alju07g2734 07 52821481 52824149 Alju07g2734 07 52821481 52824149 ECH