Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2718 ATGTGTTCCCTAAGCCGGAGTGACTTGCAGAGGATTTTTGAGAAGCTAGACAAGAAGGGGGATGGTTATGTTAGCCTTGAAAACCTGAAGAGACTAATGGAGAATATAGGTTTCGGTTTTGAAGCAGAGGAGGTTGAGTCTCTTGTGGGGAAGAAGAGCCTTAACTTGGATGAGTTCTTGACGTTTTGCGAGTCCATGTCGAGGAGCAGTAATAGCAGTGGAGAGAGCAGAGGAGGTCAAGAAGAAGAGAGAGAGCTGGTGAAGGCGTTCGAGGTGTTTGACATGGACGGAGATGGATTCATCAGCAGCCTAGAGGTGGAGAGTGTGCTCAAGAGGCTTGGCTTGTGGGATCCCAAGAGCTGCAGAGATTGCGCCTCCATGATCGGCGTTTATGACTCCAATTCTGATGGCCTCCTTGATTTCCAGGAATTTAAGAACATGATGCTGCTTACCATCCCTTGA 462 0.4827 MCSLSRSDLQRIFEKLDKKGDGYVSLENLKRLMENIGFGFEAEEVESLVGKKSLNLDEFLTFCESMSRSSNSSGESRGGQEEERELVKAFEVFDMDGDGFISSLEVESVLKRLGLWDPKSCRDCASMIGVYDSNSDGLLDFQEFKNMMLLTIP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2718 153 Gene3D - 5 67 - -
Alju07g2718 153 SMART efh_1 123 151 IPR002048 GO:0005509
Alju07g2718 153 SMART efh_1 85 113 IPR002048 GO:0005509
Alju07g2718 153 SMART efh_1 8 36 IPR002048 GO:0005509
Alju07g2718 153 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Alju07g2718 153 PANTHER CALCIUM BINDING PROTEIN 55 148 - -
Alju07g2718 153 Pfam EF hand 8 35 IPR002048 GO:0005509
Alju07g2718 153 Pfam EF-hand domain pair 85 148 IPR002048 GO:0005509
Alju07g2718 153 ProSiteProfiles EF-hand calcium-binding domain profile. 119 153 IPR002048 GO:0005509
Alju07g2718 153 CDD EFh 85 148 IPR002048 GO:0005509
Alju07g2718 153 ProSitePatterns EF-hand calcium-binding domain. 94 106 IPR018247 -
Alju07g2718 153 Gene3D - 68 149 - -
Alju07g2718 153 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Alju07g2718 153 SUPERFAMILY EF-hand 7 150 IPR011992 -
Alju07g2718 153 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2718 Alju-ChrAlju07 52694128 52694589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2718 2 149 EF-hand Containing Proteins AT1G21550 41.722 7.53e-34 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2718 07 52694128 52694589 Alju08g0342 08 2483452 2483904 CCT
Alju07g2718 07 52694128 52694589 Alju07g2718 07 52694128 52694589 ECH