Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2186 ATGGGGAAGCCCACCGGTAAGAAGAAGGATCCTGTAACACAGAAGGCTGCAAATGCAAGCGGCAAGCCGAGCAAGCCCTCTGAGAGGTCTTCCAAAGCTTTTGACGAAGACACAGCAATCTTCATTAACATGTCACAGGATCTCAAGGAAGAAGGCAATAGACTCTCTCAGAAAAGGGACCATGAAGGGGCTATGTTGAAGTACGAAAAGGCCCTCAAGCTCCTTCCCGCAAACCACATAGATGTGGCACACTTACGCACCAATATGGCGGCGTGTTATATGCAGCTCGGTCTTGGAGAGTACCCTCGAGCAATTAATGAGTGCCATTTAGCTCTTGAAGTATCACCCAGATATAGCAAGGCTCTATTGAGAAGAGCAAAGTGTTATGAAGCATTGAATCGACTTGATTATTCGCTGAGAGACGTTAATTTTGTTTTGTGCGTGGAGCCTAATAATCTTAATGCACTGGAGCTTCTCGGGAGTTTGAAAAAGACCATGGAAGAAAAAGGCATCACTATTGATGAGAAAGATTTGGAAAATTTAGAGCAGCCTACCACTGCCCCCATGCGTAAAGTGGTAAGAGAAAAACTAAAGAAAAAGAAAAGTAAAAAAAGTGATAGCAAGGCACAAGATAAGGTGATTCTCGAGGATACTGCGAATGCTGTTAAAGATAAAGAAGTGGTGACAAAAACAACTGCAAAAAAGGAAGTGGTTCTGAAGCCTGTTAAAGAACAAAAAGTAGTCACAAGGACGGTGAAGTTGGTATTTCGAGATGATATAAGGTCGGCGCAGTTGCCATTGAATTGTAGCATGAGGTTGGTGAGGGATGTAATTAAGGATCGATTTCCTGGGTTGAAGGGTGTTCTTGTTAAATATAAGGATCAAGAAGGTGATTTGGTTACTATCACTACTACTGATGAATTAAGATTAGCTGAATCTTCAGGTGATGCCTTGGGTTCTCTTCGACTCTATGTTACAGAAGTCAATCCAGAGGAGGAACCAACTTATGATGGAATAACCAATGGGGATGAGATGCAAGGTGACAGTATTGAGCATGGGTCAACGGAAGCAGGCCAGGATTTAGCAAATAAGCGTACTAATGTGGAGGATTGGATAATCCAATTTGCTAGGATGTTCAAGAATCATGTTGGGTTTGATTCTGATTCATACTTGGATTTGCATGACGTGGCTATGAAGCTATATTCAGAAGCCTTGGAGGATGTGGTGACGAGTGATGATGCTCAAGAGCTTTTTCAAATCGCTGCAGATAAATTTCAAGAGATGACAGCTTTGGCATTATTTAATTGGGGTAATGTTCACATGTCCAGTGCAAGGAGACGTGTTTCCATTTCAGAGGACGGGTCAACGGAATCTGCTTATGAGCGAATTAAAGCTGCATATGAGTGGGCAAGAAAGGAGTACAAGAAAGCAGAGAAGAGATATGAAGAAGCCTTGAAAATCAAAACAGACTTCTATGAGGGATTTCTGGCACTTGGCCATCAGCAGTTCGAGCAAGCAAAGCTCTGCTGGTATTACGCAATGGCATGCAAAACGAATTTAGAGGATGGCGCTTCCAGTGAGGTTTTACAACTATATAACAAGGCAGAGGACTGCATGGATAGAGGCATGTTGATGTGGGAGGAGATTGAAGAGCAGCGTTTAAATGGACTATCCAAATTGGATAAATATAGAGCGCATTTGGAAAAAATGGGCTTAGATGGCCTTGGCCTTGTTGAGGATATTTCTTCTGATGAAGCGGCAGACCAGGCTGCAAATGTGAGGTCACAAATATATATTTTATGGGGCAACATATTGTATGAGCGTTCTGTTGTGGAATATAAGATAGGCTTACCTTCATGGGAGGAATGTTTGGAGGTTGCAGTCGAGAAGTTTGAACTATCTGGAGCTTCTCCGACAGATATAGGGGTCATGGTAAAGAATCATTGTTCCAATCAAACAGCACTAGAAGGTTTGGCGTTCAAAATTGACGAGATAGTACAGGCATGGAATGAAATGTATGATGCCCAGAGGTGGCAGTTTGGTGTACCATCATTTCGTCTTGAACCATTGTTTCGGCGGCGTGTTCCCAGACTCCATCACATCTTGGAGCATTTTTGA 2118 0.4278 MGKPTGKKKDPVTQKAANASGKPSKPSERSSKAFDEDTAIFINMSQDLKEEGNRLSQKRDHEGAMLKYEKALKLLPANHIDVAHLRTNMAACYMQLGLGEYPRAINECHLALEVSPRYSKALLRRAKCYEALNRLDYSLRDVNFVLCVEPNNLNALELLGSLKKTMEEKGITIDEKDLENLEQPTTAPMRKVVREKLKKKKSKKSDSKAQDKVILEDTANAVKDKEVVTKTTAKKEVVLKPVKEQKVVTRTVKLVFRDDIRSAQLPLNCSMRLVRDVIKDRFPGLKGVLVKYKDQEGDLVTITTTDELRLAESSGDALGSLRLYVTEVNPEEEPTYDGITNGDEMQGDSIEHGSTEAGQDLANKRTNVEDWIIQFARMFKNHVGFDSDSYLDLHDVAMKLYSEALEDVVTSDDAQELFQIAADKFQEMTALALFNWGNVHMSSARRRVSISEDGSTESAYERIKAAYEWARKEYKKAEKRYEEALKIKTDFYEGFLALGHQQFEQAKLCWYYAMACKTNLEDGASSEVLQLYNKAEDCMDRGMLMWEEIEEQRLNGLSKLDKYRAHLEKMGLDGLGLVEDISSDEAADQAANVRSQIYILWGNILYERSVVEYKIGLPSWEECLEVAVEKFELSGASPTDIGVMVKNHCSNQTALEGLAFKIDEIVQAWNEMYDAQRWQFGVPSFRLEPLFRRRVPRLHHILEHF 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2186 705 SUPERFAMILY CAD & PB1 domains 248 337 - -
Alju07g2186 705 SMART PB1_new 249 328 IPR000270 GO:0005515
Alju07g2186 705 MobiDBLite consensus disorder prediction 332 359 - -
Alju07g2186 705 PANTHER PROTEIN CLMP1 1 704 IPR044517 -
Alju07g2186 705 Gene3D Tetratricopeptide repeat domain 43 173 IPR011990 GO:0005515
Alju07g2186 705 ProSiteProfiles PB1 domain profile. 249 328 IPR000270 GO:0005515
Alju07g2186 705 SUPERFAMILY TPR-like 34 167 IPR011990 GO:0005515
Alju07g2186 705 SMART tpr_5 458 491 IPR019734 GO:0005515
Alju07g2186 705 SMART tpr_5 45 78 IPR019734 GO:0005515
Alju07g2186 705 SMART tpr_5 83 118 IPR019734 GO:0005515
Alju07g2186 705 SMART tpr_5 119 152 IPR019734 GO:0005515
Alju07g2186 705 Coils Coil 460 487 - -
Alju07g2186 705 CDD PB1 251 326 - -
Alju07g2186 705 Gene3D - 235 328 - -
Alju07g2186 705 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Alju07g2186 705 MobiDBLite consensus disorder prediction 1 35 - -
Alju07g2186 705 Pfam PB1 domain 249 327 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2186 Alju-ChrAlju07 47955211 47957414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2186 28 152 Calmodulin-binding Proteins AT3G25230 32.117 3.03e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2186 07 47955211 47957414 Alju08g0823 08 6204965 6207209 CCT