Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1929 ATGGCTTCGTCTCTGATGCTCCTCCTCTTGTTTGCCGTCTTCACCCTGTCGTCCGCCTTGGACATGTCAATCATCTCCTACGACAGAAATCATGCCGACGGCTCAAACTGGAGGACCGATGAGGAGGTCAGGGACATGTACGACCACTGGCTTTTGCAACATGGCAAGGTCTACAACGGCTTGGGGGAGAAAGACAAGAGGTTTCAGATCTTCAAGGATAACCTCAGGTTCATCGATGAGCGCAACGCCGAGAACCGGACCTACAAGCTTGGCTTGAATCGGTTCGCCGATCTGACCAACGACGAGTTCCGGGCCAAGTATCTTGGAACCAGGGTCGATCCCAAGAGAAGGATTGCCAAGACCAGGAGCAACCGTTACGCTCCACGTGTCGGTGACAAATTGCCGGATTCTGTTGATTGGAGGAAGGACGGCGCCGTGGTCGAGGTCAAAGACCAAGGAAGTTGCGGGAGCTGCTGGGCTTTTTCAACTGTCTCTGCCGTGGAAGGAATTAACAAGATAGTGACGGGAGATTTAATTTCACTATCAGAGCAAGAGCTGGTCGATTGTGATACAACATATAATGAAGGATGCAACGGTGGGCTCATGGACTATGGCTTTCAGTTCATCATCAACAATGGTGGCATTGACACCGAAGAAGATTACCCCTATCGCGCTGTTAATGGTAGATGTGACACATACAGGAAAAATGCTAAGGTCGTATCAATTGATGCCTACGAGGACGTTCCTGCCAATGACGAGGCGTCATTGAAAAAGGCTGTTGCACATCAGCCAGTGAGCGTTGCCATGGAAGGTGGTGGCAGGGAATTCCAGTTATATGTATCCGGCGTCTTCACTGGAGCTTGTGGAACATCATTGGATCATGGTGTCACAGCTGTGGGATACGGTACAGAAAATGGAGTTGATTATTGGATAGTTAGAAACTCATGGGGGAAGAGCTGGGGAGAGGGCGGGTATGTGAGATTGGAACGTAATTTGGCTACAAGCAGCTCTGGAAAATGTGGAATTGCAATGGAATCATCTTACCCAATCAAGAAAGGCCCAAATCCTCCTAACCCTGGACCATCACCTCCTTCACCTGTAAAGCCACCAACTGTTTGTGATGGTTACTACAGTTGTGCTGAGAGCACTACTTGCTGCTGCGTATACGAATATGGTAAGTATTGCTTTTCCTGGGGATGTTGTCCTCTTGAAGCTGCCACCTGCTGTGAAGACCACTCCAGTTGCTGCCCTCACGACTATCCCATCTGCAACCTTGAACAGGGCACTTGTCTCTTGAACAAGAACAGTCCATTTGGAGTGAAGGCTATGAAGCGCACTCCAGCTAAACCCCACTGGGCTTTTGGTGCTATGAACAAAGTAAGCAGTGCTTAA 1392 0.4943 MASSLMLLLLFAVFTLSSALDMSIISYDRNHADGSNWRTDEEVRDMYDHWLLQHGKVYNGLGEKDKRFQIFKDNLRFIDERNAENRTYKLGLNRFADLTNDEFRAKYLGTRVDPKRRIAKTRSNRYAPRVGDKLPDSVDWRKDGAVVEVKDQGSCGSCWAFSTVSAVEGINKIVTGDLISLSEQELVDCDTTYNEGCNGGLMDYGFQFIINNGGIDTEEDYPYRAVNGRCDTYRKNAKVVSIDAYEDVPANDEASLKKAVAHQPVSVAMEGGGREFQLYVSGVFTGACGTSLDHGVTAVGYGTENGVDYWIVRNSWGKSWGEGGYVRLERNLATSSSGKCGIAMESSYPIKKGPNPPNPGPSPPSPVKPPTVCDGYYSCAESTTCCCVYEYGKYCFSWGCCPLEAATCCEDHSSCCPHDYPICNLEQGTCLLNKNSPFGVKAMKRTPAKPHWAFGAMNKVSSA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1929 463 PRINTS Papain cysteine protease (C1) family signature 309 315 IPR000668 GO:0006508|GO:0008234
Alju07g1929 463 PRINTS Papain cysteine protease (C1) family signature 294 304 IPR000668 GO:0006508|GO:0008234
Alju07g1929 463 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Alju07g1929 463 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 39 348 IPR013128 GO:0008234
Alju07g1929 463 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
Alju07g1929 463 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Alju07g1929 463 SMART pept_c1 134 350 IPR000668 GO:0006508|GO:0008234
Alju07g1929 463 SUPERFAMILY Granulin repeat 370 404 - -
Alju07g1929 463 FunFam Cysteine protease 1 370 433 - -
Alju07g1929 463 Pfam Papain family cysteine protease 134 350 IPR000668 GO:0006508|GO:0008234
Alju07g1929 463 Gene3D Cysteine proteinases 26 352 - -
Alju07g1929 463 Pfam Granulin 384 431 IPR000118 -
Alju07g1929 463 FunFam Cysteine protease 1 23 352 - -
Alju07g1929 463 CDD Peptidase_C1A 135 349 IPR039417 -
Alju07g1929 463 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 309 328 IPR025661 -
Alju07g1929 463 SUPERFAMILY Cysteine proteinases 38 350 IPR038765 -
Alju07g1929 463 Gene3D Granulin 370 432 IPR037277 -
Alju07g1929 463 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 292 302 IPR025660 -
Alju07g1929 463 SMART GRAN_2 373 430 IPR000118 -
Alju07g1929 463 SMART Inhibitor_I29_2 47 103 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1929 Alju-ChrAlju07 45587310 45590122 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1929 07 45587310 45590122 Alju08g1049 08 7898953 7902392 CCT
Alju07g1929 07 45587310 45590122 Alju07g1929 07 45587310 45590122 ECH