Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3222 ATGGCACACGCTCCGCAAACCCTTGTGGCCACCGAATCGGAGCTCGATGAACCTCCTCCTCCAGGCCCTCTTTCTCCTCACTCCCCAAACCCTACTTCTCCTGACCGCTTGATGAATCCAGATTCCACCCGAATCCCGACCCTCCTCCATATTTCCTTCAATCAGGATTCCGGCTGCTTCGCAGTGGGCACGGACCATGGTTTCCGGATCTACAATTGCGATCCATTCCGCGAGATCTTTCGGAGGGACTTTGGTGCTGGTGGTGGAATCGGTTTAGTTCAGATGCTGTTTCGTTGCAACATACTTGCCTTTGTCGGTGGCGGAGCTGACCCTATTTACCCAAGTAACAAAGTAATGATTTGGGATGATCATCAGTCCCGGTGTATCGGCGAGCTATCGTTTCGATCCGAGGTCAAAGGGGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTCGTATATAATTTCGCAGATCTTAAGTTGTTACACCAAATTGAGACAACGGCCAACCCAAAGGGACTTTGCGAGGTTTCGCACGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGATTGCAGAAGGGTCAGGTGAGGGTCGAACATTACGCCTCAAAGCGGACCAAGTTTATAATGGCGCACGATTCTAGAATAGCTTGCTTCGCGCTTACGCAGGATGGGCGGTTGCTTGCCACCGCCAGCAGCAAGGGAACTCTGGTCAGGATTTTCAATACATTGGATGGTTCATTGCTCCAAGAGGTAAGGAGGGGTGCAGACCGAGCAGAGATATACAGCCTGGCCTTTTCTGCTACTGCGCAGTGGCTAGCTGTCTCGAGTGATAAAGGAACTGTTCATGTCTTCAACTTGAAGGTTGATTCAGGACTATTGGGGCTTGAGAGAGTACAGAGTGCATCTGAATCTAATCCTGCCAACCCGTCAGCCGCTTCATCTCTTTCATTTATAAAAGGTGTTCTGCCCAAGTATTTTAGCTCAGAATGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGTTTGCAACATATTGTTGCCTTTGGCCATCTGAAGAACACAATTGTAATACTTGGGATGGATGGAAGCTTCTATCGATGCCAGTTTGATCCGGTCAATGGTGGAGAGATGAGCCAAGTTGAATATCATAACTTCTTGAAGCCAGGAGAAATAATCTAG 1194 0.4891 MAHAPQTLVATESELDEPPPPGPLSPHSPNPTSPDRLMNPDSTRIPTLLHISFNQDSGCFAVGTDHGFRIYNCDPFREIFRRDFGAGGGIGLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGLERVQSASESNPANPSAASSLSFIKGVLPKYFSSEWSVAQFRLHEGLQHIVAFGHLKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYHNFLKPGEII 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3222 397 Gene3D - 42 377 IPR015943 GO:0005515
Alju03g3222 397 FunFam Autophagy-related protein 18a isoform A 46 376 - -
Alju03g3222 397 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Alju03g3222 397 SMART WD40_4 207 247 IPR001680 GO:0005515
Alju03g3222 397 SMART WD40_4 250 291 IPR001680 GO:0005515
Alju03g3222 397 SMART WD40_4 38 72 IPR001680 GO:0005515
Alju03g3222 397 MobiDBLite consensus disorder prediction 16 30 - -
Alju03g3222 397 MobiDBLite consensus disorder prediction 1 41 - -
Alju03g3222 397 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 46 390 - -
Alju03g3222 397 SUPERFAMILY WD40 repeat-like 46 293 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3222 Alju-ChrAlju03 56503038 56505597 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1905 01 15628008 15631796 Alju03g3222 03 56503038 56505597 CCT
Alju03g3222 03 56503038 56505597 Alju03g3222 03 56503038 56505597 ECH
Alju01g0530 01 3986451 3989316 Alju03g3222 03 56503038 56505597 ECH