Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0530 ATGGCTACCGTCTCTACCACTACCAGCTCTTCACCTCCATGGACAAGCCCTAACCCTAATTCCGATCTTAACCCCGAATTTCATGAAGACCAGTCACAAACCCTTGACTTGGACTCCATAATACATCGCCAATCAACCCTACCTCACCAAATATCGTCTCAGCCAAGTTCCCCTAAGAGTCCGCCAAAGTCTCATGTTCCGATGACCCCGACTCTGCTTCAGCTCTCTTTCAACCAAGATCAAGCTTGCTTCGCCGCCGCCACCGACAACGGGTTTCGCATCTACAATTGCGACCCATTTCGGGAGCTCTTCCGCAGAGAATTTGATGGAGGAGATGGCAGTACTGGGGGGGTTGGTCAAGTGGAAATGCTCTTTCGCTATAATATGCTGGCACTGGTTGGAGGTGGCACCCATCCTCAATACCCTCCCACCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCATTCCGATCAGCTGTTCGTGGTGTCCGGCTACGACGAGACCGAATAATTGTCGTTGTGGAGCAGAAGATTTTTGTGTACAATTTCGCTGACTTTAAGTTACTTCACCAAATTGAGACCGTTGCAAACCCGAAGGGACTCTGTGCAGTTTCGCAATCGGCTGATTCTATGATATTGGCGTGTCCCGGTTTGCATAAGGGTCAGATACGAGTTGAGCATTATGCACAGAGAAAAACCAAATTCATTTCGGCGCATGATTCAAGAATAGCTTGTTTCGCTCTTACTCTTGATGGACAGTTACTCGCCACCGCCAGTACCAAGGGTACTTTAATTCGAATTTTTGATACAGCCAATGGCACGCTGCTTCAAGAGGTAAGAAGGGGTGCAAATGTGGCAGAGGTCTATAGTTTGGCGTTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGCTAACTCTAGTTCTCCCCAGCATGAAAATTTGCAGATTGCAACTGAGTCTCATGCTGCCAGTACACCATCTAGCTCACCCCGCAGATTTGTTAAATTTAAAGGAGTATTACCGAAATATTTTAATTCGGAGCGGTCACTTGCTCAGTTTCGCTTACATGAGGGCACTTGTTACACTGTTGCATTTGGTCAGCAAAAGAATACAGTCATAATTCTTGGCATGGATGGGAGTTTCTACCGGTGTCAGTTTGATCCAGAGCATGGTGGTGAGATGAATAAACTGGAATATCAGAACTTCTTAATGCCAGAGACGGCCTCGTGA 1284 0.4727 MATVSTTTSSSPPWTSPNPNSDLNPEFHEDQSQTLDLDSIIHRQSTLPHQISSQPSSPKSPPKSHVPMTPTLLQLSFNQDQACFAAATDNGFRIYNCDPFRELFRREFDGGDGSTGGVGQVEMLFRYNMLALVGGGTHPQYPPTKVMIWDDHQGRCIGELSFRSAVRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETVANPKGLCAVSQSADSMILACPGLHKGQIRVEHYAQRKTKFISAHDSRIACFALTLDGQLLATASTKGTLIRIFDTANGTLLQEVRRGANVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSPQHENLQIATESHAASTPSSSPRRFVKFKGVLPKYFNSERSLAQFRLHEGTCYTVAFGQQKNTVIILGMDGSFYRCQFDPEHGGEMNKLEYQNFLMPETAS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0530 427 MobiDBLite consensus disorder prediction 1 69 - -
Alju01g0530 427 FunFam Autophagy-related protein 18a isoform A 70 406 - -
Alju01g0530 427 SMART WD40_4 58 96 IPR001680 GO:0005515
Alju01g0530 427 SMART WD40_4 235 275 IPR001680 GO:0005515
Alju01g0530 427 SMART WD40_4 364 403 IPR001680 GO:0005515
Alju01g0530 427 SMART WD40_4 278 319 IPR001680 GO:0005515
Alju01g0530 427 MobiDBLite consensus disorder prediction 1 28 - -
Alju01g0530 427 SUPERFAMILY WD40 repeat-like 62 403 IPR036322 GO:0005515
Alju01g0530 427 Gene3D - 63 409 IPR015943 GO:0005515
Alju01g0530 427 MobiDBLite consensus disorder prediction 37 59 - -
Alju01g0530 427 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 69 420 - -
Alju01g0530 427 Pfam WD domain, G-beta repeat 292 318 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0530 Alju-ChrAlju01 3986451 3989316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0530 01 3986451 3989316 Alju01g0530 01 3986451 3989316 ECH
Alju01g0530 01 3986451 3989316 Alju03g3222 03 56503038 56505597 ECH