Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3156 ATGGCTCCTGACATCACCACCGTCGTGGCCAACGCCAACGCCACGGCCACCGCCACCGCCACCCAGGCAAAGGCCACAGGGGACCGTGCCTTCGTGACTTTCCTCGCCGGCACTGGTGACTACGTGAAGGGAGTGGTGGGACTGGCCAAGGGTCTGAGAAAGGTGAAGAGCAAGTACCCTTTGGTGGTTGCTATTCTGCCAGATGTTCCCCAGGAGCACCGTCAGATCCTAATCTCCGAAGGCTGCATCGTCCGCGAGATCGAGCCGGTCCACCCCCCTGAGAACCAAACCAAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGTATCTGGGAGTTCGTGGAGTACAACAGGATGATCTATCTTGATGGAGACATCCAGGTGTTTGACAACATAGACCACCTTTTGGATCTGCCAAACGGCTACTTCTACGCCGTGATGGACTGTTTCTGCGAGAAAACTTGGAGCCACACCCCACAGTACAAGATCGGCTACTGCCAGCAGTGCCCTGATAAGGTTCGATGGCCAACGGAGTTTGGACCCAAGCCTCCACTGTACTTCAACGCAGGCATGTTTGTTTACGAGCCTAATCTGTCCACCTACCGTGACCTCCTCAAAACCCTTCAAGTCACTGAGCCTACTTCCTTCGCTGAGCAGGACTTCCTGAACATGTACTTCAAGGACAAATATAAGTCCATACCCAACGTTTACAACCTTGTGCTGGCCATGCTATGGCGTCACCCTGAGAACGTTGAGCTTCACAAAGGGAAAGTGGTTCACTATTGTGCTGCTGGGTCAAAGCCATGGAGATACACAGGGAAAGAGGAAAACATGGACAGGGAAGACATAAAGATGCTGGTGAAGAAGTGGTGGGACATATACGAGGATGAGACGTTGGACTATGTGAACCCAGTGAATGTGGGGCGTATTCAGGAGGCACTATCCGAGGCTGGTCGGGTTGCATTCGTACCCGCCCCATCTGCCGCTTAG 999 0.5315 MAPDITTVVANANATATATATQAKATGDRAFVTFLAGTGDYVKGVVGLAKGLRKVKSKYPLVVAILPDVPQEHRQILISEGCIVREIEPVHPPENQTKFAMAYYVINYSKLRIWEFVEYNRMIYLDGDIQVFDNIDHLLDLPNGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVRWPTEFGPKPPLYFNAGMFVYEPNLSTYRDLLKTLQVTEPTSFAEQDFLNMYFKDKYKSIPNVYNLVLAMLWRHPENVELHKGKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYEDETLDYVNPVNVGRIQEALSEAGRVAFVPAPSAA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3156 332 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 27 306 IPR029044 -
Alju03g3156 332 CDD GT8_Glycogenin 29 299 - -
Alju03g3156 332 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 299 - -
Alju03g3156 332 FunFam Hexosyltransferase 27 305 - -
Alju03g3156 332 Pfam Glycosyl transferase family 8 33 275 IPR002495 GO:0016757
Alju03g3156 332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 303 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3156 Alju-ChrAlju03 56136343 56137653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3156 1 332 Glycosyltransferase AT1G56600 74.561 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0291 01 2241997 2243368 Alju03g3156 03 56136343 56137653 CCT
Alju03g3156 03 56136343 56137653 Alju03g3156 03 56136343 56137653 ECH
Alju01g0411 01 3118781 3120227 Alju03g3156 03 56136343 56137653 ECH