Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0411 ATGGCCCCCGAACTCGTCCCTACCGTGGTTAAATCCGGTGTCTTTAGCAGCCCCGCCACCCTGCCGAGTCGCGCCTACGTCACATTCCTTGCCGGGAATGGTGACTATGTGAAAGGCGTTGTGGGCCTGGCGAAGGGCCTGAGGAAGGTGAGGTCGGCGTATCCCTTGGTGGTGGCCGTCCTCCCCGACGTGCCGGAGGATCACCGTCGGATCTTGGAGTCTCAGGGCTGCATCATCCGCGAGATCCAACCCGTTTATCCTCCCGAGAACCAGACTCAATTCGCCATGGCCTACTACGTCATCAACTACTCTAAGCTCCGTATTTGGGAGTTTGTGGAATATAGCAAGATGATATATTTGGACGGAGACATTCAAGTGTACGACAACATTGACCACCTATTTGATCTGCCGGACGGACACTTTTACGCCGTCATGGACTGCTTCTGCGAGAAGACCTGGAGCCACACTCCGCAGCACAAGATCGGGTACTGCCAGCAATGTCCGGACAGGGTACAGTGGCCGGCCGAGATGGGTGAACCGCCTGCTCTGTACTTCAATGCCGGCATGTTCGTGTTCGAGCCTGGCATGGAGACATACCACGATCTCTTGAAGACACTCCAAATCACTCCTCCAACACCTTTTGCGGAGCAGGATTTCTTGAACATGTACTTCAAGCCCGTTTACAAACCTATTCCCTTGGTCTACAACCTCGTCCTCGCCATGTTGTGGCGCCACCCTGAGAATGTGGACCTTGACCAAGTCAAAGTTGTCCATTACTGCGCTGCGGGATCGAAGCCGTGGAGATATACGGGGAGAGAAGAGAACATGGATAGAGAGGACATAAAGATGCTGGTTAAGAAATGGTGGGACATATACAAGGACGAATCCTTGGACTACGACAAGGGCAGGAATGGAGTCGAAGGTGATGCTGAATCAGTGAAGAAGGAATCATTGATAGCAGCAATGTCAGAGGCTGGTCAACTCCCGTATATAACAGCACCTTCTGCTGCTTAA 1014 0.5296 MAPELVPTVVKSGVFSSPATLPSRAYVTFLAGNGDYVKGVVGLAKGLRKVRSAYPLVVAVLPDVPEDHRRILESQGCIIREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQHKIGYCQQCPDRVQWPAEMGEPPALYFNAGMFVFEPGMETYHDLLKTLQITPPTPFAEQDFLNMYFKPVYKPIPLVYNLVLAMLWRHPENVDLDQVKVVHYCAAGSKPWRYTGREENMDREDIKMLVKKWWDIYKDESLDYDKGRNGVEGDAESVKKESLIAAMSEAGQLPYITAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0411 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 299 IPR029044 -
Alju01g0411 337 FunFam Hexosyltransferase 22 300 - -
Alju01g0411 337 CDD GT8_Glycogenin 24 294 - -
Alju01g0411 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 325 - -
Alju01g0411 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Alju01g0411 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0411 Alju-ChrAlju01 3118781 3120227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0411 1 337 Glycosyltransferase AT1G56600 75.000 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0411 01 3118781 3120227 Alju01g0411 01 3118781 3120227 ECH
Alju01g0411 01 3118781 3120227 Alju03g3156 03 56136343 56137653 ECH