Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3044 ATGGCCACACTTCTGCCTCTCGACAGAGTCATTCATCTTTCTCAAGGCATTTCCAAATTAAATCCAATAATGGCTTCCTTCTCATGCATCCTGAGTATCACTTTGATACTTCTGGTGGTTGTGGGCGGAGAAGGACGTGATCCATTTGCATGTGACCGGAAAGTCGCTAACACGAGCACGCTGCCATTTTGCCGAACATCGCTGTCAACTGCGGAGAGAGTGAAGGACCTGATCGGAAGGCTGACGCTGGCAGAGAAAGTGAGGCTGCTGGTGAACAATGCGGCGGGGATTCCACGGCTTGGGATTAAAGGGTACGAGTGGTGGTCCGAAGCACTCCACGGCGTTTCCAATGTGGGTCCCGGCACCAAGTTTGCCGGACCATTCCCCGCCGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAACGCATCCCTGTGGGAGGCTATCGGACAGGTTGTGTCAGACGAAGCAAGAGCCATGTATAACGGAGGAACGGCTGGGCTGACGTACTGGAGCCCAAACGTGAACATATTGAGGGACCCCAGGTGGGGACGTGGACAGGAAACTCCCGGTGAAGATCCCGTCGTAGCTGGTAGATATGCTGCTCATTACGTGAGGGGGTTACAGGGAACGGACGCCAACCGGTTGAAGGTTGCTGCTTGTTGCAAGCATTTTACGGCTTATGATCTTGATAATTGGAACGGCATGGATCGCTTCCACTTTAATGCTCAGGTTAGCAAGCAGGACATAGAGGACACGTTCGACGTGCCATTCAGGATGTGTGTGAAGGAAGGGAATGTGGCGAGTGTGATGTGTTCGTATAATCAGGTGAATGGTAAGCCCACGTGCGCTGACCCCAACCTGCTGAAGCGAACAGTTCGTGGGCGGTGGCATCTCAATGGCTACATTGTCTCCGACTGTGACTCCGTCGGGGTCTTCTTCTCCAACCAACATTATACTTCAACCCCGGAGGAGGCTGCCGCCGATGCCATCAAAGCAGGTTTGGATTTGGACTGTGGCCCTTTCCTTGCTAAACACACTCAGGACGCCGTCAACAAGGGCTTACTCTCCGAAGCCGATGTCAACGGTGCGCTCGTTAATACCTTAACGGTCCAAATGAGACTGGGCATGTTCGACGGAGAACCATCGGCTCAGCCATATGGCCACTTGGGTCCAAAAGATGTGTGCACCCCTGCGCACCAGGATCTCGCCCTCCAAGCTGCCACCCAAGGTATCGTCCTCCTCAAGAACGATGGTCCTACTTTGCCCCTCTCTCCACGTCGTCACCGTACCGTGGCTGTCGTTGGTCCCAATTCTAATGTCACCGTTACCATGATCGGTAACTATGCAGGTATTGCTTGCGGATACACCAGTCCGTTGCAAGGAATAGGGAAATATGCGACGACTATTCACCAGCTAGGTTGTGTGAATGTGGCTTGTACTGATGACAAACAGTTCGGAGGCGCTTTGGATGCGGCCCGTCGAGCCGACGCAACAGTTCTAGTGATGGGCCTAGATCAGTCCACTGAGGCTGAAACCGTTGACAGGACCGGCTTGCTGCTGCCTGGCCATCAACAAGACCTCGTATCAAAGGTGGCGGCAGCCTCTAAGGGGCCAACTATTTTGGTCTTGATGTCCGGCGGTCCTGTTGACGTCACTTTCACCAAGAACGACCCACGTGTTGCTGCCATCTTGTGGGCTGGCTATCCAGGCCAAGCCGGTGGCGCCGCCATCGCCGATATCTTGTTTGGAACCGCAAACCCAGGTGGCAAGCTGCCAATGACATGGTATCCACAAGATTACCTCACCAACTTACCGATGACAAATATGGCAATGAGAGCAAGCCGGTCGAGAGGTTACCCTGGAAGAACATACAGATTTTACAAGGGGCCGGTGGTGTACCCGTTTGGCTACGGATTAAGCTACACCCACTTTGTTCACACGTTGGCCAGAGCGCCGAAGGTGGTGTCGGTTCCGGTGGATGGGCACCGCCATGGGAATAAAAGCAACATTTCAAACAAAGCAATTAGAGTGACACATGCGAGATGCGGAAAGCTGTCCGTTAGCCTCCACGTGGATGTTAAGAATGCTGGGTCCATGGACGGCACTCACACGCTGTTAGTGTTCTCAGCACCACCTGCGGGCGGACACTGGGCCCCGCACAAGCAACTGGTGGCCTTCGAGAAGGTGCACGTTCCTGCCAAAGCTCAGCAGCGAGTGAGACTCAATATTCATGTGTGCAAATTGCTCAGTGTAGTGGACAGTTCTGGGATTAGGAGGATTCCCTTGGGTGATCATAATCTTCACATTGGCGATGTCAAACACTCCATATCGCTTCGACCACAAACACTCGGAATTATCAAGACCTGA 2379 0.5343 MATLLPLDRVIHLSQGISKLNPIMASFSCILSITLILLVVVGGEGRDPFACDRKVANTSTLPFCRTSLSTAERVKDLIGRLTLAEKVRLLVNNAAGIPRLGIKGYEWWSEALHGVSNVGPGTKFAGPFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNILRDPRWGRGQETPGEDPVVAGRYAAHYVRGLQGTDANRLKVAACCKHFTAYDLDNWNGMDRFHFNAQVSKQDIEDTFDVPFRMCVKEGNVASVMCSYNQVNGKPTCADPNLLKRTVRGRWHLNGYIVSDCDSVGVFFSNQHYTSTPEEAAADAIKAGLDLDCGPFLAKHTQDAVNKGLLSEADVNGALVNTLTVQMRLGMFDGEPSAQPYGHLGPKDVCTPAHQDLALQAATQGIVLLKNDGPTLPLSPRRHRTVAVVGPNSNVTVTMIGNYAGIACGYTSPLQGIGKYATTIHQLGCVNVACTDDKQFGGALDAARRADATVLVMGLDQSTEAETVDRTGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDVTFTKNDPRVAAILWAGYPGQAGGAAIADILFGTANPGGKLPMTWYPQDYLTNLPMTNMAMRASRSRGYPGRTYRFYKGPVVYPFGYGLSYTHFVHTLARAPKVVSVPVDGHRHGNKSNISNKAIRVTHARCGKLSVSLHVDVKNAGSMDGTHTLLVFSAPPAGGHWAPHKQLVAFEKVHVPAKAQQRVRLNIHVCKLLSVVDSSGIRRIPLGDHNLHIGDVKHSISLRPQTLGIIKT 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3044 792 PRINTS Glycosyl hydrolase family 3 signature 295 313 IPR001764 GO:0004553|GO:0005975
Alju03g3044 792 PRINTS Glycosyl hydrolase family 3 signature 221 237 IPR001764 GO:0004553|GO:0005975
Alju03g3044 792 PRINTS Glycosyl hydrolase family 3 signature 134 153 IPR001764 GO:0004553|GO:0005975
Alju03g3044 792 Gene3D Immunoglobulins 669 789 IPR013783 -
Alju03g3044 792 Pfam Fibronectin type III-like domain 708 775 IPR026891 -
Alju03g3044 792 SMART Fn3_like_2 707 777 IPR026891 -
Alju03g3044 792 Gene3D - 73 389 IPR036962 GO:0004553|GO:0005975
Alju03g3044 792 SUPERFAMILY (Trans)glycosidases 61 414 IPR017853 -
Alju03g3044 792 Gene3D - 400 646 IPR036881 GO:0004553|GO:0005975
Alju03g3044 792 FunFam probable beta-D-xylosidase 2 400 646 - -
Alju03g3044 792 PANTHER SUGAR HYDROLASE-RELATED 39 780 IPR044993 GO:0009044|GO:0045493
Alju03g3044 792 FunFam probable beta-D-xylosidase 7 73 387 - -
Alju03g3044 792 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 415 648 IPR036881 GO:0004553|GO:0005975
Alju03g3044 792 Pfam Glycosyl hydrolase family 3 C-terminal domain 415 645 IPR002772 GO:0004553|GO:0005975
Alju03g3044 792 FunFam Probable beta-D-xylosidase 2 670 789 - -
Alju03g3044 792 Pfam Glycosyl hydrolase family 3 N terminal domain 130 370 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3044 Alju-ChrAlju03 55378724 55382810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3044 26 792 Glycoside Hydrolase AT1G02640 74.055 0.0 1190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0448 01 3392605 3397737 Alju03g3044 03 55378724 55382810 CCT
Alju03g3044 03 55378724 55382810 Alju03g3044 03 55378724 55382810 ECH