Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0448 ATGGCTATGTCGACGTCGCCGTTGCTGGTTACAGCGTACTTGGCGGTGATACTGGTGGGGGTAGGGGTGCAGAGGAGCGAGGCGGCAGAGCCTCTGGCCTGCGATCCCAGAGACGGGAACACCAAGAACTTGGGGTTTTGCAGGGCGTCGCTGCCCATAGGGGAGAGGGTGAGGGACCTGATCGGGAGGCTGACACTGCAGGAGAAGGTGACGTTGCTGGGGGACAATGCGGCGGCGATTCCAAGGCTGGGGATCAAAGGGTACGAGTGGTGGTCGGAGGCGCTTCACGGGGTTTCCAATGTGGGTCCCGGAACAAAGTTCGCTCCTCCGTTCCCTGCCGCCACTAGTTTCCCCCAAGTCATCACCGCCGCTGCTTCTTTTAATGCTTCCTTATGGGAGTCTATCGGACGGGCTGTGTCGGACGAAGCAAGGGCAATGTATAATGGGGGAATAGCTGGGCTCACGTTCTGGAGCCCAAACGTGAACATTTTCAGGGACCCACGGTGGGGGCGTGGGCAGGAGACTCCCGGTGAAGACCCTGTCCTGGCCGGTGCATATGCCGCCAGTTACGTCCAGGGCCTCCAGGGAAACGACGGTAACCGGTTAAAGGTTGCCGCATGTTGCAAGCACTTTACGGCTTACGACCTCGATAACTGGAACGGCGTGGATCGATTCCATTTTAATGCACAGGTGAGCAAGCAGGACATAGAGGATACGTTCGATGTGCCATTTAGAATGTGTGTGAAGGATGGGAAAGTGGCGAGCGTCATGTGCTCCTACAACCAAGTTAATGGTGTCCCCACCTGCGCCGATCCCAACCTCCTCAAGAAAACTGTTCGTGCCCAATGGCGTCTTGATGGATACATCGTATCAGACTGCGACTCTGTTGGGGTTCTCTTCGCCAGCCAGCATTATGCTTCCTCACCCGAAAAAGCTGCTGCTGCTGCTATCAAAGCAGGATTGGATTTGGACTGTGGGCCTTTCTTAGCTTTGCATACGCAAGATGCAGTGACAAAAGGCTTGTTAAGCGAAGCGGACGTCAACGGTGCTTTGGTGAATACCCTCACTGTCCAAATGAGGCTGGGCATGTTTGACGGAGAGCCCTCGGCTCAGCCATATGGGAAGCTGGGTCCTGCAGATGTGTGCTCCAAGGCCCACCAAGACTTGGCCCACGAAGCCGCCGTCCAGGGAATTGTTCTCCTCAAGAACTCCGGCCCTTCTTTGCCCCTCTCTCTACGTCGTCACCGTACTGTCGCCGTCATCGGCCCTAATTCCGATGCTTCTGTTACCATGATTGGTAATTACGCTGGTGTTGCCTGTGGATACACCACTCCTTTACAAGGAATTGGGAGATACGCCAAGACAATTCACCAAGCAGGTTGTGCAAATGTGGCCTGTGCCGATGACAAACTATTTAGTGCGGCTGTAAAGGCGGGCCGTCATGCTGATGCCACGGTTCTAGTAATGGGCCTAGACCAATCCCTTGAGGCTGAAACCATGGACAGGGCTAGCTTGCTAATGCCCGGGCGTCAACAAGATCTTATTACCCAGGTGGCAGCCGCCTCCAAGGGCCCAACTATTTTGGTCTTGATGTCTGGCGGGCCTCTTGACATAACTTTTGCAAAGAACAATCCACGAGTTGCGGGCATCTTGTGGGTGGGTTATCCTGGCCAAGCCGGTGGAGCCGCCATCGCAGACATCTTGTTCGGAGCTGCCAACCCAGGAGGGAAGCTGCCAATGACATGGTATCCACAAGAGTATCTCACAAACTTGCCGATGACAGATATGAGAATGCGAGCGAGCCAGCCCCCAGGGTACCCGGGAAGAACCTATCGATTCTACGAGGGTCCGGTGGTGTACCCATTCGGGCACGGATCAGGCTACAGCCAGTTCGTACACACGTTGGCAAGTGCGCCGACGTTGGTGTCGGTTCCGGTGGATGGGCATCGCAAGGTGAACACCACAGACATTTCAAACAAAGCAATCAGGGTGACGCATGCAAAATGTGGAAAGTTGTCCATGACCCTTCATGTAGATGTTAAGAATATGGGCTCCAAGGACGGCACTCACACCTTGTTAGTCTTCTCGGCCCCTCCGTCTGGGCGTCACTGGGCTCCGCGCAAGCAATTGGTGGCCTTTCACAAGGTACATGTCCCAGCCCAGGCCCAACAACGAGTCCAAGTCAACATTCACGTTTGCAAATTCCTGAGCGTTGTTGATAAATCTGGAATTCGAAGAATTCCATTGGGTGAACACAATATTAACGTTGGGAATCTAAGACACTCCGTGTCGCTTCAAGCCCAATCCCTTGGGATCATCAAGACCTGA 2328 0.5455 MAMSTSPLLVTAYLAVILVGVGVQRSEAAEPLACDPRDGNTKNLGFCRASLPIGERVRDLIGRLTLQEKVTLLGDNAAAIPRLGIKGYEWWSEALHGVSNVGPGTKFAPPFPAATSFPQVITAAASFNASLWESIGRAVSDEARAMYNGGIAGLTFWSPNVNIFRDPRWGRGQETPGEDPVLAGAYAASYVQGLQGNDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKDGKVASVMCSYNQVNGVPTCADPNLLKKTVRAQWRLDGYIVSDCDSVGVLFASQHYASSPEKAAAAAIKAGLDLDCGPFLALHTQDAVTKGLLSEADVNGALVNTLTVQMRLGMFDGEPSAQPYGKLGPADVCSKAHQDLAHEAAVQGIVLLKNSGPSLPLSLRRHRTVAVIGPNSDASVTMIGNYAGVACGYTTPLQGIGRYAKTIHQAGCANVACADDKLFSAAVKAGRHADATVLVMGLDQSLEAETMDRASLLMPGRQQDLITQVAAASKGPTILVLMSGGPLDITFAKNNPRVAGILWVGYPGQAGGAAIADILFGAANPGGKLPMTWYPQEYLTNLPMTDMRMRASQPPGYPGRTYRFYEGPVVYPFGHGSGYSQFVHTLASAPTLVSVPVDGHRKVNTTDISNKAIRVTHAKCGKLSMTLHVDVKNMGSKDGTHTLLVFSAPPSGRHWAPRKQLVAFHKVHVPAQAQQRVQVNIHVCKFLSVVDKSGIRRIPLGEHNINVGNLRHSVSLQAQSLGIIKT 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0448 775 Gene3D Immunoglobulins 651 772 IPR013783 -
Alju01g0448 775 SMART Fn3_like_2 690 760 IPR026891 -
Alju01g0448 775 FunFam probable beta-D-xylosidase 2 383 629 - -
Alju01g0448 775 Pfam Glycosyl hydrolase family 3 N terminal domain 113 352 IPR001764 GO:0004553|GO:0005975
Alju01g0448 775 SUPERFAMILY (Trans)glycosidases 46 397 IPR017853 -
Alju01g0448 775 FunFam probable beta-D-xylosidase 7 56 370 - -
Alju01g0448 775 Gene3D - 383 629 IPR036881 GO:0004553|GO:0005975
Alju01g0448 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 631 IPR036881 GO:0004553|GO:0005975
Alju01g0448 775 PANTHER SUGAR HYDROLASE-RELATED 29 763 IPR044993 GO:0009044|GO:0045493
Alju01g0448 775 FunFam Probable beta-D-xylosidase 2 653 772 - -
Alju01g0448 775 Pfam Fibronectin type III-like domain 691 758 IPR026891 -
Alju01g0448 775 PRINTS Glycosyl hydrolase family 3 signature 117 136 IPR001764 GO:0004553|GO:0005975
Alju01g0448 775 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Alju01g0448 775 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Alju01g0448 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 628 IPR002772 GO:0004553|GO:0005975
Alju01g0448 775 Gene3D - 56 372 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0448 Alju-ChrAlju01 3392605 3397737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0448 12 775 Glycoside Hydrolase AT1G02640 72.360 0.0 1171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0448 01 3392605 3397737 Alju03g3044 03 55378724 55382810 CCT
Alju01g0448 01 3392605 3397737 Alju01g0448 01 3392605 3397737 ECH