Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3042 ATGACAATGGCCGTCGCTACTACCTCTCTCAATGCTTCAGATAAGAAGCACTGGTGGCTTACCAACCGAAAGGTTGTTGAGAAGTACATCAAAGACGCTCGCAGCCTCATTGCGACCCAAGAACAGAGCGAGATCGCATCGGCTCTGAACCTTGTAGACGCGGCACTGGCCATATCTCCACGCCTAGACCAGGCACTGGAGCTCAGAGCCAGGTCTCTTCTTTATCTCCGGCGTTTTAAGGAGGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTCAAGATGGCGGTCGAGGACTCGAGCTCTTGTTCTTCGGATAGTTCGTCTCAGCAGCTCTCAAGGGAGGGAGTGAAGCTGCTATCGTCTTCGGAATCTTCGCCGGATCAGAGTTTCAAGTGCTTCTCCGTCTCCGACTTGAAGAAGAAAGTGATGGCAGGACTGTGTAAAAGTGGCGAGAAGGGAGGGCAATGGAGATACTTGCTGCTGGGTCAAGCATGTTGCCATCTCGGTCTGATGGAGGATGCCATGGTTCTTCTCCAAACCGGTAAACGACTTGCCAGCGCCGCCTTCCGCCGTGAAAGCGTCTGCTGGTCCGACGACAGCTTCTCCTTAACAAACATTCCCTTCTCCGGTGACGCAGCCAACCCCCCTCCCACTACTCCACCTCGGACACCTCTGACCGAATTCGAGAGCGTCACACAACTCCTCAACCACATCAAGCTCCTCGTCCGCCGCCGCACTGCGGCGCACGCCGCCCTCGACGCCGGTCTCTATTCTGAGGCCATCCGCCACTTCTCCAAAATCGTCGATGGCCGCCGTGGTGCTCCGCAAGCCTTTCTTGCCGAATGCTATATGCACAGAGCCTCTGCCTACCGTTCCGCAGGCCGAATCGCGGAGGCCATTGCGGATTGTAATCACACTCTAGCTTTGGACCCCACTTGCATTCAAGCTCTTGATACCAGAGCTTCCCTTCTAGAATCCGTTCGGTGCTTGCCTGATTGCCTACATGATCTTGAACACTTGAAGCTTTTGTACAATACGATCTTGCGGGACCGCAAGCTTCCAGGTCCAGCTTGGAAGCGTCATAATGTAAGGTACAGAGAGATTCCTGGGAAACTTTGTGCTCTGACGACGAAAATTCAAGAACTGAAGCAAAGGGTGGCTTCAGGGGAAACTGGTAATGTGGATTACTACGCTTTGATTGGACTGCGGCGTGGTTGCTCTCGATCGGAGTTGGAGAGGGCTCATTTATTGCTCTGCTTACGGCACAAACCGGATAAAGCTACCAGCTTCATTGATCGCTGTGAGCTTGCGGATGAACGTGATCTTGAAAACGTGAAGGAGAGGTCAAAAATGTCAGCGTTGTTATTGTACAGATTGATTCAGAAGGGTTACACAAGTGTGATGGCTTCGATCATGGATGAAGAAGCGGCCGAGAAGCAGAGGAAGAAGGCGGCGGCTGCTTTGCAAGCGGCACAAGCAGCAGCAATTCAGGTTCAGGAAAAAAGTGGGTGCAGAGCGGACTACGAGGGAAAGAAATCTGACAAAACTGTATCTTCATCGACGGTCAATCCTTCTGTATTCCAGGGGGTGTTTTGCCGTGATCTTGCCGTCGTTGGGAGCTTGCTTTCTCAAGCGGGATTCAACCGTTCAATTCCAATGAAATATGAGGCATTGAGCTGCTGA 1686 0.5243 MTMAVATTSLNASDKKHWWLTNRKVVEKYIKDARSLIATQEQSEIASALNLVDAALAISPRLDQALELRARSLLYLRRFKEVADMLQDYIPSLKMAVEDSSSCSSDSSSQQLSREGVKLLSSSESSPDQSFKCFSVSDLKKKVMAGLCKSGEKGGQWRYLLLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLTNIPFSGDAANPPPTTPPRTPLTEFESVTQLLNHIKLLVRRRTAAHAALDAGLYSEAIRHFSKIVDGRRGAPQAFLAECYMHRASAYRSAGRIAEAIADCNHTLALDPTCIQALDTRASLLESVRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATSFIDRCELADERDLENVKERSKMSALLLYRLIQKGYTSVMASIMDEEAAEKQRKKAAAALQAAQAAAIQVQEKSGCRADYEGKKSDKTVSSSTVNPSVFQGVFCRDLAVVGSLLSQAGFNRSIPMKYEALSC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3042 561 SUPERFAMILY TPR-like 248 342 IPR011990 GO:0005515
Alju03g3042 561 Coils Coil 475 495 - -
Alju03g3042 561 CDD DnaJ 396 430 IPR001623 -
Alju03g3042 561 Gene3D DnaJ domain 381 525 IPR036869 -
Alju03g3042 561 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Alju03g3042 561 Gene3D Tetratricopeptide repeat domain 229 354 IPR011990 GO:0005515
Alju03g3042 561 PANTHER OS01G0273500 PROTEIN 10 561 - -
Alju03g3042 561 SMART tpr_5 281 314 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3042 Alju-ChrAlju03 55366120 55368442 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0449 01 3415462 3417804 Alju03g3042 03 55366120 55368442 CCT
Alju03g3042 03 55366120 55368442 Alju03g3042 03 55366120 55368442 ECH