Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0449 ATGGCCGTCACTTCTCCTTCCCCCAACGCTTCCCACAAGAACCACTGGTGGCGCACCAACCGTGAGATTGTTGCGAAATACATTAAAGACGCTCGCGCCCTGATTGCCACCCTAGAACAGAGCCAAATCGCTTCTGCTCTGAACCTTCTAGACGCGGCTCTGGCCATCTATCCCCACCATGACAGGGCACTGGAACTCAAAGCCAGGTCTCTCCTGTTTCTGCGGCGCTTCAAGGAGGTGGCTGATATGCTTCAGGATTACATTCCCAGCCTCAAAGCCACAAGCGAAGACTCATCCTCCTTTTCTTCTGATAATTCGTCAAACCAGTTTTCTAGGGAGGGGGTGAAGCTCCTTTCCTCTTCGTCGGAGTTGTTGAGTCGGGATCAGAGTTTCAAGTGCTTCTCTGTATCAGACTTGAAGAAGAAAGTCATGGCAGGACTATTCAAAAGCTCTGAGGAAGAAGGGCAATGGAGGTACTTGGTTCTCGGCAAAGCATGCTTTCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACAAGCAAACGCATTGCCGGCGACGCCTTCCGCCGTGAAAGCATTTGCTGGTCTGATGACAGCTTCTTCTTATCAGCTATTACTTCCTCTGGTGACGCTACCAACCAAACACCCTCCACGACTATTAATACACCTCTCTCCGAATTCGAAGGCATCGCCCAACTCCTCAACCACATCAAGCTCCTCCTACGGCGTCGCACGGCTGCACTTGCCACCCATGAGGCTGGTCTATACTCTGAAGCCATCCGACATTTTTCCAAAATCGTTGATGGCCGCCGCACTGTGCCACAAGGTTTTCTCGCCGAGTGTCATATGCTCAGAGCCTCCTCCTACCGCTCCGCCGGTCGCATTGCAGAGGCTATTGCTGACTGTAATCATACTCTGGCACTTAACCCGTCTTGCATTCAAGCTCTTGATACCAGAGCCTCCCTTCTTGAAACAATTCGATGCTTGCCGGATTGCTTGCACGATCTTGAACACTTGAAACTTCTGTATAATTCGATCCTGCGTGATCGAAAGCTTCCAGGTCCTGCTTGGAAGCGTCATAATGTGAGGTACAGAGAAATTCCTGGGAAACTCTGCACTCTCACCACTAAAATCCAAGAACTGAAACGAAGAGTGGCATCTGGAGAAACTAAGAACGTTGATTATTATGCTCTGATCGGGTTGCCTCGTGTGTGTTCTCGGTCGGAGTTGGAGAGAGCTTATCGTTTGCTTTGCTTACGGCACAAGCCTGATAAAGCTTTCAACTTTATTGATCGGTGCGAGCTGGCAGACGAACGTGATCTCGAATCAGTGAAGGAAAGAGCTAAAATGTCCGCTTTGTTGCTATATAGATTGCTTCAGAAAGGGTATACAGGTATAATGGCAATAATTATGGATGAGGAGGCAGCTGAAAAACAGAGAAAGAAAGCAGCAGCAGCATTGCAAGCAGCGCAAGCAGCCGAGTCTTCTAGATTGGGGTCTAATTTGAATGTGTCGGAGAAATTAGGTGGCAGTAGGAATAATTGTACAGTGGAAAATTTACCCACATTAGTATCTTCTTCGATTGCGAATTCGTCAGTCTTCCCGGGCCCATTTTGCCGTGATCTTGCTGCAGTCGGGAATTTGCTTTCGTCCGTGGCATTCAACAATCCAATTCCGGTGAAGTTTGAGGCATTGAGCTGTTGA 1710 0.4865 MAVTSPSPNASHKNHWWRTNREIVAKYIKDARALIATLEQSQIASALNLLDAALAIYPHHDRALELKARSLLFLRRFKEVADMLQDYIPSLKATSEDSSSFSSDNSSNQFSREGVKLLSSSSELLSRDQSFKCFSVSDLKKKVMAGLFKSSEEEGQWRYLVLGKACFHLGLMEDAMVLLQTSKRIAGDAFRRESICWSDDSFFLSAITSSGDATNQTPSTTINTPLSEFEGIAQLLNHIKLLLRRRTAALATHEAGLYSEAIRHFSKIVDGRRTVPQGFLAECHMLRASSYRSAGRIAEAIADCNHTLALNPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTTKIQELKRRVASGETKNVDYYALIGLPRVCSRSELERAYRLLCLRHKPDKAFNFIDRCELADERDLESVKERAKMSALLLYRLLQKGYTGIMAIIMDEEAAEKQRKKAAAALQAAQAAESSRLGSNLNVSEKLGGSRNNCTVENLPTLVSSSIANSSVFPGPFCRDLAAVGNLLSSVAFNNPIPVKFEALSC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0449 569 Coils Coil 475 495 - -
Alju01g0449 569 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Alju01g0449 569 SUPERFAMILY TPR-like 246 339 IPR011990 GO:0005515
Alju01g0449 569 SMART tpr_5 281 314 IPR019734 GO:0005515
Alju01g0449 569 PANTHER OS01G0273500 PROTEIN 4 569 - -
Alju01g0449 569 CDD DnaJ 396 428 IPR001623 -
Alju01g0449 569 SMART dnaj_3 395 477 IPR001623 -
Alju01g0449 569 Gene3D Tetratricopeptide repeat domain 18 347 IPR011990 GO:0005515
Alju01g0449 569 Gene3D DnaJ domain 381 501 IPR036869 -
Alju01g0449 569 ProSiteProfiles dnaJ domain profile. 396 456 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0449 Alju-ChrAlju01 3415462 3417804 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0449 01 3415462 3417804 Alju03g3042 03 55366120 55368442 CCT
Alju01g0449 01 3415462 3417804 Alju01g0449 01 3415462 3417804 ECH