Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3014 ATGTGCAGCTTTTGCTTTATAAATAGAGGTCAGATCAATGGAGGAGGTGTGGCAGGCCAAGTTCACAGTCGTCGTTGTTTGGACAGTTCAACAATGACTTTCTTCGTCTTGCTCTTGCTCGTTTCCCTCTTTTCTGCTTCTCACGCCTTCCCTCACCACAGCCACCACCGTCGCTTTGCCTCTAACAATTACAGAGATGCCCTCTCCAAATCCATCCTCTTCTTTGAAGGACAGAGGTCCGGCAAACTCCCTCCTAAACAGAGGATGACTTGGAGGGGGGACTCTGCTCTCTCAGACGGCTCTGCAATCCATGTTGATTTAGTGGGAGGGTACTACGATGCAGGGGACAATGTCAAGTTTGGTTTTCCCATGGCATTCACAGCCACTATGCTTTCCTGGAGTGTTATTGAGTTTGGTGGACTGATGAAAGGTGAAGTGCAGAATGCTAGAGAAGCGATTCGTTGGGCTACGGATTATATACTTAAGGCTACTCAACATCCAGACGTCATTTACGTTCAGGTGGGAGATGCTAGAAGTGATCACGTTTGTTGGGAGAGACCGGAGGACATGGATACCCCAAGAAATGTGTACAAGATAGATAAGAACAACCCTGGTTCAGATGTGGCCGCTGAAACTGCAGCCGCTCTAGCTGCTGCTTCTCTGGTTTTCAAGAAATGTGACCCCGCCTACTCCAAAACTCTAGTCACCAGGGCTACAAGGGTGTTTGAGTTTGCTGATAAATACAGGGGAGCTTATAGTGATGGGCTGAAGCCCATTGTATGCCCTTTCTATTGCTCTTACTCTGGTTATCAGGATGAGCTGTTATGGGGTGCTGCTTGGCTGCACAAGGCTACTGGGAAGCCCATGTACCTAAACTATATTCAAGTGAATGGACCCACCCTTGGGGCTGCGGAGTTTGATAATATGTTTGGGTGGGATAACAAGCATGTTGGAGCCAGGGTACTGCTTTCCAAGGAATTCCTTGTTCAAAAAGTACAATCGCTCCATGACTACAAGGCTCACGCGGACAATTTCATATGTTCCATAATTCCTGGGACCTCTTTCTCTTCTTCCCAGTATACCCCAGGGGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTATGTGACGTCCACTTCCTTCCTGCTCTTAACCTACGCCAAGTACCTGACCTCAGCCCACATGTCTGTCAGCTGTGGTGGAGCCACTGTCACCCCCAAGACTCTTCGCACCATGGCCAAAAAACAGGTTGATTACTTGCTGGGAGATAACCCCTTGAAGATGTCCTACATGGTGGGGTACGGTCCAAATTACCCGCGAAGGATCCACCACAGGGGATCATCTCTACCGTCCATTGCAGTGCACCCCGCCAAGATCCAATGCTCCGCAGGCTTCAGCGCCTTGAGCTCACAGAGCCCCAATCCCAACGAACTAGTGGGCGCGGTGGTTGGTGGGCCAGACTTGCACGATAGGTTTTCGGATGAACGGTCAGATTATGCGCAGTCGGAGCCAGCCACGTACACGAACGCCCCTCTTGTAGGCGCCCTGGCTTATCTCGCTCACTCATTCGGCCAACTCTAA 1584 0.5019 MCSFCFINRGQINGGGVAGQVHSRRCLDSSTMTFFVLLLLVSLFSASHAFPHHSHHRRFASNNYRDALSKSILFFEGQRSGKLPPKQRMTWRGDSALSDGSAIHVDLVGGYYDAGDNVKFGFPMAFTATMLSWSVIEFGGLMKGEVQNAREAIRWATDYILKATQHPDVIYVQVGDARSDHVCWERPEDMDTPRNVYKIDKNNPGSDVAAETAAALAAASLVFKKCDPAYSKTLVTRATRVFEFADKYRGAYSDGLKPIVCPFYCSYSGYQDELLWGAAWLHKATGKPMYLNYIQVNGPTLGAAEFDNMFGWDNKHVGARVLLSKEFLVQKVQSLHDYKAHADNFICSIIPGTSFSSSQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHMSVSCGGATVTPKTLRTMAKKQVDYLLGDNPLKMSYMVGYGPNYPRRIHHRGSSLPSIAVHPAKIQCSAGFSALSSQSPNPNELVGAVVGGPDLHDRFSDERSDYAQSEPATYTNAPLVGALAYLAHSFGQL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3014 527 PANTHER ENDO-1,4-BETA-GLUCANASE 35 522 - -
Alju03g3014 527 Pfam Glycosyl hydrolase family 9 64 517 IPR001701 GO:0004553|GO:0005975
Alju03g3014 527 Gene3D - 59 527 IPR012341 GO:0005975
Alju03g3014 527 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 420 446 IPR018221 -
Alju03g3014 527 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 493 511 IPR033126 -
Alju03g3014 527 FunFam Endoglucanase 60 525 - -
Alju03g3014 527 SUPERFAMILY Six-hairpin glycosidases 61 525 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3014 Alju-ChrAlju03 55188042 55190296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g3014 27 523 Glycoside Hydrolase AT1G02800 75.449 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0481 01 3610539 3612668 Alju03g3014 03 55188042 55190296 CCT
Alju03g3014 03 55188042 55190296 Alju03g3014 03 55188042 55190296 ECH