Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0481 ATGCCTCTCTCCCTTCACTCCTCTGCTTTACTGCTCCTTCTTTCTCTCTTCTCCACCACTCTGATTCACTGCCATGCCTTCTATCTCCGCGACAATCACCCTCCTCACCATCTCCGTCACCCTCGTTTCGCCGCCCACAACTACAGAGATGCTCTCTCCAAATCCATTCTCTTTTTTGAAGGTCAGAGATCGGGGAAGCTCCCTCCTAACCAGAGGATGACTTGGAGGAGGGACTCTGGTCTCTCTGATGGCTCTGCCTTGCACGTTGATTTGGTTGGAGGGTACTATGATGCAGGGGACAATGTCAAGTTTGGTCTTCCCATGGCATTCACCACCACCATGCTTTCCTGGAGCGTTATTGAGTTTGGGGGTCTCATGAAAGGTGAGTTGCAGAATGCCAGAGAGGCCATTCGCTGGGCTACTGATTATCTTCTCAAAGCCACTGCGCATCCAGACACCATCTATGTTCAGGTGGGAGATGCAAAAAAGGACCATGCTTGTTGGGAGAGACCTGAAGATATGGATACCCCAAGAAATGTTTACAAGATAGACAGGAATACCCCAGGTTCAGAAGTGGCCGCTGAAACTGCTGCTGCTCTTGCAGCTGCTTCTCTGGTTTTCAGAAGAAGCGACCCCATGTACTCTAAAATATTAATCAGAAGAGCTATTAGGGTGTTCCAGTTCGCTGATAGATACAGGGGATCCTACAGCAACGGCTTGAAGCCCATCGTGTGCCCTTTCTACTGCTCTTACTCTGGCTATCAGGATGAGTTATTGTGGGGAGCTGCTTGGCTGCACAAGGCGACGAAGAACCCAATGTACCTACATTACATTCAAGTTAATGGACAAACCCTTGGGGCTGCAGAGTTCGACAATACGTTTGGGTGGGATAACAAACATGCCGGAGCTAGGATCCTTCTAACCAAGGAATTTCTAGTTGAAAGGGTCCAAACCCTGCATGAATACAAGGGTCATGCAGACAATTTCATATGTTCTCTCATTCCCGGAGCTTCTTTTTCTTCAACCCAATATACCCCTGGCGGGCTTCTATTCAAGATGAGTGATAGCAACATGCAGTATGTGACGTCCTCTTCTTTCTTACTCTTAACCTACGCCAAATACTTGACCTCCTCCCACATGGTCGTTAAATGTGGAGGAGCCGCCGTGACCCCCAAGAGGCTCCGAGCAATAGCCAAGAAACAGGTGGATTACTTGCTCGGAGACAACCCGTTGAAGATGTCGTACATGGTGGGGTATGGGCCAAGGTACCCAAGAAGGATACACCACAGGGGATCATCCCTACCGTCGATCTCAGTACATCCGGGGAAGATCCAATGCTCAGCAGGCTTCAGTGTGATGAAGTCGCAATCCCCGAATCCAAACATTCTGGTGGGAGCCGTTGTGGGTGGGCCCGACCTACATGACAGGTTCGCAGATGAGCGGTCAGATTATGAGCAATCAGAGCCAGCCACTTACATCAACGCACCCCTGGTGGGAGCATTGGCCTATCTTGCTCACGCATTTGGCCAACTCTAA 1536 0.4993 MPLSLHSSALLLLLSLFSTTLIHCHAFYLRDNHPPHHLRHPRFAAHNYRDALSKSILFFEGQRSGKLPPNQRMTWRRDSGLSDGSALHVDLVGGYYDAGDNVKFGLPMAFTTTMLSWSVIEFGGLMKGELQNAREAIRWATDYLLKATAHPDTIYVQVGDAKKDHACWERPEDMDTPRNVYKIDRNTPGSEVAAETAAALAAASLVFRRSDPMYSKILIRRAIRVFQFADRYRGSYSNGLKPIVCPFYCSYSGYQDELLWGAAWLHKATKNPMYLHYIQVNGQTLGAAEFDNTFGWDNKHAGARILLTKEFLVERVQTLHEYKGHADNFICSLIPGASFSSTQYTPGGLLFKMSDSNMQYVTSSSFLLLTYAKYLTSSHMVVKCGGAAVTPKRLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSISVHPGKIQCSAGFSVMKSQSPNPNILVGAVVGGPDLHDRFADERSDYEQSEPATYINAPLVGALAYLAHAFGQL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0481 511 PANTHER ENDO-1,4-BETA-GLUCANASE 26 505 - -
Alju01g0481 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 404 430 IPR018221 -
Alju01g0481 511 FunFam Endoglucanase 44 509 - -
Alju01g0481 511 Pfam Glycosyl hydrolase family 9 48 501 IPR001701 GO:0004553|GO:0005975
Alju01g0481 511 Gene3D - 43 511 IPR012341 GO:0005975
Alju01g0481 511 SUPERFAMILY Six-hairpin glycosidases 45 509 IPR008928 GO:0005975
Alju01g0481 511 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 477 495 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0481 Alju-ChrAlju01 3610539 3612668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0481 1 507 Glycoside Hydrolase AT1G02800 74.556 0.0 765
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0481 01 3610539 3612668 Alju03g3014 03 55188042 55190296 CCT
Alju01g0481 01 3610539 3612668 Alju01g0481 01 3610539 3612668 ECH