Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2930 ATGAAATACGACGAGAGTAGAATGAAGTTTTCTGCAGATTTAGCAGAAGAGTCAAAGAAAAAGGGCAATCAGATAAGAGCACCTAAGATGACCCAACAAGACAGAGACCACACCAACTCTCTCGTACCTTCACTGTTGAGTGCTTTGAGAAAATCAATGGTGTCTTGTCGGATGCATCCACCCGACGATGTAATCTCGGTCGTCCCTCACGATTTCGAAACCGGATGGCCCACCGACGTTCAGCACATCACTCATGTCACTTTCGATCGCTTCAATGGCTTCCTGGGTCTGCCTGCCGACGTCCAGCTAGAGATTCCGGGTCGGGTTCCCAGCGCCAGTGCAAGTGTGTTCGGCGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGGAATAGTATCCCAACTATTTTGTTATTAATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGGCCGAAGGAATTTTTCGCATAAACCCAGAGAACAGTGAAGAGGAGAATGTAAGGGGGCAGTTAAACAGGGGGATTGTGCCGGACGACATTGACGTACATTGTTTGGCAGGTCTAATCAAGGCCTGGTTCCGAGAGCTGCCTTCGGGAATTCTAGATGGACTTTCTCCAGAGCAAGTTCTTCAGTGCAATACAGAACAAGAATGCGTTGAACTTGTAAAGCAATTAAAGCCCACCGAAGCTGCCTTGCTCAACTGGTCTGTTGATCTCATGGCTGATGTTGTTGAACACGAAGAACACAACAAAATGAATGCAAGAAATATTGCCATGGTTTTTGCTCCCAACATGACTCAGATGTCTGATCCTCTTACTGCTCTGATGCACGCGGTCCAAGTGATGAACTTGCTCATGACTCTTGTAATGAAGACACTCGCAGAACGAGAAGAAGCGGCAGGTTCACCCACGTCGTTCCATTCATCTGAGGATGAATATGAAAGTGAAGAAGAAATGGATACTAGTGATGGCGAAGAGGAAGCCAAAGCATCATTATGTGAGATAGAGGAGTATGCTATATCATATTCTGAAAGCGAAACTAGGAAATCCAGTTCCAGTTCTTCATGCGAAGAAAAGTCCGTGAGATCCGGTGGTGACTCAACTAGTCCATCCATAAAATACGCAGGCAACAGTAACGTGGAGATGAATACTAAATTAACAGACTCATTGCCCGGTGCCACAGTTTGCATCAAGTGA 1206 0.4594 MKYDESRMKFSADLAEESKKKGNQIRAPKMTQQDRDHTNSLVPSLLSALRKSMVSCRMHPPDDVISVVPHDFETGWPTDVQHITHVTFDRFNGFLGLPADVQLEIPGRVPSASASVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLKAEGIFRINPENSEEENVRGQLNRGIVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEQVLQCNTEQECVELVKQLKPTEAALLNWSVDLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLMTLVMKTLAEREEAAGSPTSFHSSEDEYESEEEMDTSDGEEEAKASLCEIEEYAISYSESETRKSSSSSSCEEKSVRSGGDSTSPSIKYAGNSNVEMNTKLTDSLPGATVCIK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2930 401 MobiDBLite consensus disorder prediction 347 388 - -
Alju03g2930 401 SUPERFAMILY GTPase activation domain, GAP 114 292 IPR008936 -
Alju03g2930 401 MobiDBLite consensus disorder prediction 301 331 - -
Alju03g2930 401 SMART PBD_5 74 108 IPR000095 -
Alju03g2930 401 ProSiteProfiles Rho GTPase-activating proteins domain profile. 119 300 IPR000198 GO:0007165
Alju03g2930 401 PANTHER MKIAA1688 PROTEIN 16 366 IPR044785 GO:0005096
Alju03g2930 401 MobiDBLite consensus disorder prediction 1 24 - -
Alju03g2930 401 Gene3D Rho GTPase activation protein 106 313 IPR008936 -
Alju03g2930 401 CDD CRIB 73 112 - -
Alju03g2930 401 MobiDBLite consensus disorder prediction 1 38 - -
Alju03g2930 401 CDD RhoGAP 136 294 - -
Alju03g2930 401 FunFam Rho GTPase-activating protein 5 104 297 - -
Alju03g2930 401 MobiDBLite consensus disorder prediction 345 388 - -
Alju03g2930 401 SMART RhoGAP_3 133 296 IPR000198 GO:0007165
Alju03g2930 401 Pfam RhoGAP domain 136 270 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2930 Alju-ChrAlju03 54682637 54686442 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1958 01 16198361 16200717 Alju03g2930 03 54682637 54686442 CCT
Alju03g2930 03 54682637 54686442 Alju03g2930 03 54682637 54686442 ECH