Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1958 ATGGGGGGCGAGAGAGAGAGGATGACGGGGTTCGTGATGGTGACGAAGGGCGGAGGGTGCGGCGGAGGGAAGGGAGCGAAGAGAGGAAGAACCGCCGCCGAAGAAGAGCAGAACCAGCTGTCACTCGTCGCATTCCTCTTGGCCGCTTTGAGGAAATCCATGGTGTCGTGTCGGGTGGATCGACCCGACGAGGTTATCCCCTCTGTTCGTCACATGGAAATCGGATGGCCTACCAACGTTCAGCACATCACTCATGTCACTTTCGATCGCTTCAATGGTTTTCTGGGTCTTCCCGTTGAGTTCGAGATCGAGATCCCGGGACGGGTTCCTAGTGCTAGTGTAAGTGTGTTTGGCGTGTCAGCGGAATCTATGCAGTGTTCTTATGATTCAAAAGGAAATAGTGTGCCCACTATTCTCTTACTTATGCAGGAGCGTTTATACTCACAGGGAGGCCTGAAGCGGGAAGGAATATTTCGCATAAACCCAGAAAACAGTCAAGAAGAACATGTGAGGGACCAGTTGAATAGGGGGATTGTGCCGGATGACATTGATGTGCACTGTTTGGCGGGCTTAATTAAAGCCTGGTTTCGAGAGCTTCCTTCAGGAGTACTAGATGGACTTTCACCTGAACAGGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAACCAACTGAGGCTGCCTTGCTCAACTGGGCTATTGATCTTATGGCTGATGTTGTAGAGGAGGAAGAATTCAACAAAATGAATGCAAGAAATATTGCAATGGTCTTTGCTCCAAACATGACTCAGATGTCTGATCCATTAACTGCTCTGATGCATGCGGTCCAAGTGATGAACTTGCTGAAGACCTTGATAATGAAGACACTTAGAGAACGTGAAGAAACAACAACCGGAGGATATTCACCCATGTCATTTTGTTCATCAGATCGCCAGTCTGAGGAGGGGTATGACAGTGAGCAAGAAATGGAGACCAGTGGTGAATTAAGAAGAACCAAGTCAGATCATGATGAACATGCACACTACACCCACAGCAGTGAAGAGGAAGAAGAAGAAGAAGGCTGTGCCGAATCTTTGAGTGACATCGAGGAATGCTTCTTGAAGCAGTTGGATGAGCACACAAAAGAGCACTCAGAAGAACCTGCAGGAGATTTGCAGGAGGACCGTGCTAGCCCCATAAGTCGCTCTGGCAGTAACATGGAAACTGCTATGTCATTTACTGATTGCAAAACCGAGAATTCTTGCTTGAGTTGCTCGCACGGTGAAAAATCAAGGACATCTCAGACTGCCAGGGGATCAAAAATTGATACGAGTAGTCCATCTCTAGGATGTGCAGGCAGCAATGATATGGAGATGATGGTTAAATTTACAGGTTCTGTTTCACCAGTGCCTATGTTTACCTCCAATTAG 1428 0.4755 MGGERERMTGFVMVTKGGGCGGGKGAKRGRTAAEEEQNQLSLVAFLLAALRKSMVSCRVDRPDEVIPSVRHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEIEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKREGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTTGGYSPMSFCSSDRQSEEGYDSEQEMETSGELRRTKSDHDEHAHYTHSSEEEEEEEGCAESLSDIEECFLKQLDEHTKEHSEEPAGDLQEDRASPISRSGSNMETAMSFTDCKTENSCLSCSHGEKSRTSQTARGSKIDTSSPSLGCAGSNDMEMMVKFTGSVSPVPMFTSN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1958 475 Gene3D Rho GTPase activation protein 106 300 IPR008936 -
Alju01g1958 475 MobiDBLite consensus disorder prediction 379 410 - -
Alju01g1958 475 Pfam RhoGAP domain 136 270 IPR000198 GO:0007165
Alju01g1958 475 MobiDBLite consensus disorder prediction 423 451 - -
Alju01g1958 475 CDD RhoGAP 136 292 - -
Alju01g1958 475 SMART RhoGAP_3 133 296 IPR000198 GO:0007165
Alju01g1958 475 MobiDBLite consensus disorder prediction 319 354 - -
Alju01g1958 475 ProSiteProfiles Rho GTPase-activating proteins domain profile. 119 300 IPR000198 GO:0007165
Alju01g1958 475 ProSiteProfiles CRIB domain profile. 74 87 IPR000095 -
Alju01g1958 475 MobiDBLite consensus disorder prediction 423 453 - -
Alju01g1958 475 Gene3D CRIB domain 68 105 IPR036936 -
Alju01g1958 475 SMART PBD_5 74 108 IPR000095 -
Alju01g1958 475 SUPERFAMILY GTPase activation domain, GAP 115 293 IPR008936 -
Alju01g1958 475 PANTHER MKIAA1688 PROTEIN 33 376 IPR044785 GO:0005096
Alju01g1958 475 FunFam Rho GTPase-activating protein 5 104 297 - -
Alju01g1958 475 MobiDBLite consensus disorder prediction 302 318 - -
Alju01g1958 475 MobiDBLite consensus disorder prediction 300 364 - -
Alju01g1958 475 Pfam P21-Rho-binding domain 73 100 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1958 Alju-ChrAlju01 16198361 16200717 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1958 01 16198361 16200717 Alju03g2930 03 54682637 54686442 CCT
Alju01g1958 01 16198361 16200717 Alju01g1958 01 16198361 16200717 ECH