Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2923 ATGGCGGATCAAAGGATGTCCTGGTGTGACATTGGTTCTTACGTGCTGCTTTTCATGTGTTTGATACAGATACAGAGTCAGAGTCATCTATACGTGCGTGCCATTTTGGACCCTATTGATTTCTTGGCTCTGCAATCCATTCGCAAGTCTCTGCAAGACATGCCGGGATCCAGTTTCCTTTCTTCTTGGGATTTCACTTCCGACCCATGCAAATTCTCCGGCATTTACTGTGATTCCGATAAGGTCATTGCTCTCAATCTCGGGGACCCCAGAGCCGGTGCCCCTGGCCTAACCGGAAAACTAGACCCAGCCATCGGCAGTCTATCTGCTCTCGCCGAGTTCACGGTAGTCCCGGGTAGGATATACGGCCCTCTGCCACTGACATTATCCAACTTGAAGAGCCTCCGATTCCTCGGCATCAGCCGGAACTTCATTTCCGGCGAGATTCCGTGGACCTTGGGACAGTTGTACAATCTCAAAACCCTGGACCTCAGCTACAATCAGTTGACCGGAAGCATTCCTCCGTCCGTCGGAGCATTACCGGGGTTAAACAATGTGATCCTCTGCCACAACCGTATTTCCGGTTCGGTGCCTAAGTTTGCATCGCAGACGCTAACCCGGCTCGACCTGAAGCACAATGCGCTCTCCGGTAAGCTGGCTCCCGATTCTCTCCCGGCCTCCCTCCAATATCTGTCTCTATCATGGAACCAGTTGAGTGGGCCAGTGGATCGGCTGTTGAACCGGATGGACCGACTGAGCTATCTGGATCTTAGCCTGAACAAGTTCTCGGGCATCATTCCGGGTCGGATATTCTCGTTTCCGCTCACCAATTTACAATTAGAAAGGAATGAATTTTTGGGGGCAGTCCAACCGGTTGATCAGGTGAAAATCCCAGCCGTTGATCTGAGCTACAACAGGCTGTCAGGCCAAGTGTCGGCCATGTTCTCGACCGTACAGAATCTATACCTCAACAACAACCGGTTCACGGGTCAGGTTCCGAGTAGCTTCGCGGATCGGCTGTTGGATGCGACCATACAGATACTCTACTTACAGCACAATTTTCTGACGGGGATAGCGATCAGCCCGACGGCTGAGATTCCTCTAAGCAGCTCCTTGTGTCTACAGTATAATTGCATGGTCCCACCCATAGAGACCACTTGCCCTCTGAAGGCAGGGAAGCAGATATCTAGGCCTTCTTCCCAGTGCAGCCAATGGAGGAGGGGCTAA 1227 0.52 MADQRMSWCDIGSYVLLFMCLIQIQSQSHLYVRAILDPIDFLALQSIRKSLQDMPGSSFLSSWDFTSDPCKFSGIYCDSDKVIALNLGDPRAGAPGLTGKLDPAIGSLSALAEFTVVPGRIYGPLPLTLSNLKSLRFLGISRNFISGEIPWTLGQLYNLKTLDLSYNQLTGSIPPSVGALPGLNNVILCHNRISGSVPKFASQTLTRLDLKHNALSGKLAPDSLPASLQYLSLSWNQLSGPVDRLLNRMDRLSYLDLSLNKFSGIIPGRIFSFPLTNLQLERNEFLGAVQPVDQVKIPAVDLSYNRLSGQVSAMFSTVQNLYLNNNRFTGQVPSSFADRLLDATIQILYLQHNFLTGIAISPTAEIPLSSSLCLQYNCMVPPIETTCPLKAGKQISRPSSQCSQWRRG 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2923 408 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Alju03g2923 408 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Alju03g2923 408 Gene3D Ribonuclease Inhibitor 40 204 IPR032675 -
Alju03g2923 408 SUPERFAMILY L domain-like 275 379 - -
Alju03g2923 408 FunFam Nuclear pore complex protein NUP107 39 199 - -
Alju03g2923 408 Gene3D Ribonuclease Inhibitor 205 387 IPR032675 -
Alju03g2923 408 Pfam Leucine Rich repeat 202 217 IPR001611 GO:0005515
Alju03g2923 408 Pfam Leucine Rich Repeat 158 179 IPR001611 GO:0005515
Alju03g2923 408 SUPERFAMILY L domain-like 39 288 - -
Alju03g2923 408 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2923 Alju-ChrAlju03 54641828 54643054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2923 43 357 Receptor kinase-like Gene Family AT5G62230 29.969 2.30e-34 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1944 01 16038074 16041139 Alju03g2923 03 54641828 54643054 CCT
Alju03g2923 03 54641828 54643054 Alju03g2923 03 54641828 54643054 ECH