Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1944 ATGGCGCGGCCAACAAAGCGGGCATGCGGCATTGTTTTCTATATTCTGGTTTTCGTGAGTTTAGCACAGATACAGTGTCGTTTCCATGTGCTTGCCATGTTGGACCCTCTTGATTTCTTGGCTCTGCAATCGATTCGCAAGTCTCTCAAGGATTTGCCCGGCTCGAATTTCTTTGCCTCTTGGGATTTCACTGCTGACCCCTGTAATTTCGACGGAGTTTACTGTGATTCCGACAAGGTCGTTGCCCTTAATCTCGGCGACCCCAGAGCCGGTTCTCCCGGTCTAACAGGTAAGCTCGACCCGGCGATCGGTAAGCTATCTGCTCTTTCTGAGTTCACGGTTGTGCCTGGTAGAATCTACGGTTCTCTGCCTCAGTCATTCTCTAATTTGAAGAATCTCAGATTCCTTGGCGTTAGCCGGAACTTCATTTCCGGCGAGATTCCCGAGCAATTGGGCAGGTTGCGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACCGGACGCATTCCTTCATCCATCGGAGCCTCGCCGGAGCTAAACAACTTGATCCTCTGCCACAACCATCTCACCGGTTCAGTCCCGTCGTTTGCGTCACACACTCTTACTCGACTTGACCTGAAGCACAACTCTCTAACAGGCTCGCTCGCTCCCGATTCTCTTCCTCCCTCACTCCAATATCTCTCCCTGTCCTGGAATAATCTCAATGGCCCAGTGGACCGGCTCTTGAACCGGATGAACCAGTTGAACTACTTGGACCTTAGCTTGAACCGGTTCACAGGCATCATTCCGGCACACATATTCTCACTCCCACTCACCAATCTTCAACTGGAAAGGAACCAATTCACCGGCCCTGTCCAACCGGTTAATCAGGTCACAATCTCAACCGTCGATCTCAGCCACAACGAGTTTTCGGGTCAGATATCACCCATGTTTTCGACCGTGGAGAATCTATACCTCAACAACAACCGATTCTCGGGTCGGGTTCCGAGCAACTTCGTGGACCGGCTGCTGGCCGCCAGAATACAGATACTGTATTTGCAGCACAACTATCTGACCGACATTGAGATCAGTCCAACGGCTGAGATTCCTGTGAGCAGCTCGTTGTGTCTTCAATACAACTGTATGGTACCGCCCATACAGACGCCATGCCCCTTGAGGTCTGGGAAACAGATAACGAGGCCTACTGCACAATGCAGCCAATGGAGAGGGAGGTGGGTGCTGCTTTCTGCAATGGCGTATGGAAAGCGAGGGGAACTCTTTCTGGCTCTGCATTGTATTGTGTTGTGGGGAATAGATCTTTTTGGATTGGGAGGACTCCACCTTTCTAGTTGTCTCTTTTTTGTTTGTGTTCGTGTTTGTGTGGCCACTCTTCAAGACTTCAAGTCCTTACCAGTTACCAAACAAGATGGAAAAGACGGGAATCTTTGGAAGCATATGGAATTAATACAAGGATTGGTGTTGCATAACCAGAAATTCCATGTTGATGCTTCAGCAACAGTATTGGGAACTCCATCCGTCTGTCATGAAGCGACATACATACGAGGACTTTGTTTGCTGATATTACCTGGAACGTCCATGCATATGCTTGAATGTTTGAAGGCGTGTGCACATAAATATGATGGAGCAGAGTTGATCAGTTACACAGAAGGGAGCGAGAAGGCGCCATCACGATGGGGTCATCTAAAACCCCAGAATGGGCAGCCTGTAACAATGGAACTATTCAGTCCCCTATATATTGATTATGATTTATGA 1758 0.4898 MARPTKRACGIVFYILVFVSLAQIQCRFHVLAMLDPLDFLALQSIRKSLKDLPGSNFFASWDFTADPCNFDGVYCDSDKVVALNLGDPRAGSPGLTGKLDPAIGKLSALSEFTVVPGRIYGSLPQSFSNLKNLRFLGVSRNFISGEIPEQLGRLRNLRTLDLSYNQLTGRIPSSIGASPELNNLILCHNHLTGSVPSFASHTLTRLDLKHNSLTGSLAPDSLPPSLQYLSLSWNNLNGPVDRLLNRMNQLNYLDLSLNRFTGIIPAHIFSLPLTNLQLERNQFTGPVQPVNQVTISTVDLSHNEFSGQISPMFSTVENLYLNNNRFSGRVPSNFVDRLLAARIQILYLQHNYLTDIEISPTAEIPVSSSLCLQYNCMVPPIQTPCPLRSGKQITRPTAQCSQWRGRWVLLSAMAYGKRGELFLALHCIVLWGIDLFGLGGLHLSSCLFFVCVRVCVATLQDFKSLPVTKQDGKDGNLWKHMELIQGLVLHNQKFHVDASATVLGTPSVCHEATYIRGLCLLILPGTSMHMLECLKACAHKYDGAELISYTEGSEKAPSRWGHLKPQNGQPVTMELFSPLYIDYDL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1944 585 Pfam Leucine rich repeat 124 167 IPR001611 GO:0005515
Alju01g1944 585 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Alju01g1944 585 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 405 - -
Alju01g1944 585 FunFam Nuclear pore complex protein NUP107 37 197 - -
Alju01g1944 585 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Alju01g1944 585 Gene3D Ribonuclease Inhibitor 201 383 IPR032675 -
Alju01g1944 585 SUPERFAMILY L domain-like 55 383 - -
Alju01g1944 585 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Alju01g1944 585 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1944 Alju-ChrAlju01 16038074 16041139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1944 41 354 Receptor kinase-like Gene Family AT5G62230 33.742 1.47e-39 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1944 01 16038074 16041139 Alju03g2923 03 54641828 54643054 CCT
Alju01g1944 01 16038074 16041139 Alju01g1944 01 16038074 16041139 ECH