Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2914 ATGGCGGCTGGGCCAGCACTGCCGACCGATCACGCTCCTCCCATGGCACCTGCTATGGTGCCGATGCAATCAACACCCGTTATGGTTTCGGACTCCTTTGCTAAAGACGCTATTATTTCTTGGTTCCGCAGCGAATTTGCCGCCGCCAACGCCGTTATTGACGCTCTCTGCGGTCACCTTGCTCAGCTCAGTGCAGCCACTGGAGCCTCCGACTATGATTCTGTTTTTTCCGCAATTCATCGCCGGAGATTGAACTGGATACCGGTCATACAAATGCAGAAGTATCACTCAATAGCTGAAGTGGCCATGGAGCTTCGCAAACTCGCTGAGAAGAAGACAGTGGCCATAGAAAGGAGCCAAGATAACTGCAAGAGTGAGGACGCGAACGCTTGTTCGGAAGACAAGAAGAAAATCAACCAGAAAATAATGGATATCGACGGAAATGGCGGTCACGAGGCTCCTGATGAAGAGTATGATTCGCCGGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTTGATGAACAGCAGTATATGCTCCAACCACGAAGAATGTGAAGGACGTGGTGCCCAGATAAAGTTGACGAAAGGTTTCTCAGCAAAGGAGTCGGTGAAGGGGCACATGGTGAATGTAGTGAAAGGATTGAAGTTATATGAGGACGTTTTCAGTGATTCAGAACTCTGCAGGCTGTGTGACTTCGTCAATGAGATCCATTCTGCTGCCCAAAATGGGGAACTCTCAGGCGAAACTTTTATACTGTTCAACAAACAGATGAAGGGCAATAAGAGAGAGCTGATTCAGCTTGGTGTTCCAATTTTTGGACAGATCAAGGAGGATGCAAAAAGCAATATAGAGCCAATTCCAGCTCTTCTTCAAAGCGTCATTGATCATCTTATTCAGTGGAAACTACTTCCAGAGTACAAAAGGCCGAATAGTTGCATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTTAAACCACCTCATCTGGACCAACCTGTGTCTACTTTGCTTCTCTCTGAATCAACTATGGCTTTCGGGCGTACCCTTACCAGCGACAGTGAAGGGAACTACAAAGGGCCGCTCATGCTCTCACCCAAGAATGGGTCTCTGCTAGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGCCCATCCCCAAACAGAAGGGTCAGCATCACCTTTTTCAGGGTAAGGCCAGACTCCAACCAAAGCCAAACACCAATTCCTTCCATGGCAACAGCAATGACTGTTTGGCAACCAGGAATAGCAAGTAGCCCATATGCTTTGGCAAATGGAGCTGTCAGTGGCAGTGAGGCCATGGACATGATGATGCCCAAGTGGGGAATAATTCGTGCCCCAATGGTCATGCTTACCCCTATGCGTCCTATGGTGTTGAGTTCTCGCAAGCTTCCTCGTGGTGGTGGTGGGACAGGGGTGTTCTTACCCTGGAACGTCCCTTCCAGAAAACATGCCAAGCATCTTCCTCCTCGTGCCCAGAAAGGACGGCTTCTGGTTTTACCTCCTCCAATTGAGTCACACTCTCACATGGAAGAGTCCACTTCTGACTCCACCATTACTGTTGAAGCGCAAGTATGA 1629 0.4856 MAAGPALPTDHAPPMAPAMVPMQSTPVMVSDSFAKDAIISWFRSEFAAANAVIDALCGHLAQLSAATGASDYDSVFSAIHRRRLNWIPVIQMQKYHSIAEVAMELRKLAEKKTVAIERSQDNCKSEDANACSEDKKKINQKIMDIDGNGGHEAPDEEYDSPESEITDSGSQEMQASLMNSSICSNHEECEGRGAQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFSDSELCRLCDFVNEIHSAAQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQSVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLTSDSEGNYKGPLMLSPKNGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSQTPIPSMATAMTVWQPGIASSPYALANGAVSGSEAMDMMMPKWGIIRAPMVMLTPMRPMVLSSRKLPRGGGGTGVFLPWNVPSRKHAKHLPPRAQKGRLLVLPPPIESHSHMEESTSDSTITVEAQV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2914 542 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 313 410 IPR005123 -
Alju03g2914 542 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 34 514 IPR044842 GO:0003729|GO:0006402|GO:0032451
Alju03g2914 542 Pfam 2OG-Fe(II) oxygenase superfamily 317 407 IPR044861 -
Alju03g2914 542 SUPERFAMILY Clavaminate synthase-like 209 409 - -
Alju03g2914 542 MobiDBLite consensus disorder prediction 144 171 - -
Alju03g2914 542 MobiDBLite consensus disorder prediction 523 542 - -
Alju03g2914 542 Gene3D - 202 416 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2914 Alju-ChrAlju03 54565226 54569343 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1934 01 15937485 15941998 Alju03g2914 03 54565226 54569343 CCT
Alju03g2914 03 54565226 54569343 Alju03g2914 03 54565226 54569343 ECH