Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1934 ATGACAACAGCCCCTGTTCCGCCAACGATCGATCGTGTTCTTCCGGCCGGGACAACAATGCTGCCGATGCAACCACCGCCCTTGTTCATTTCTGACTCCTTTGCCATGATTTCCTGGTTTCGTAGTGAGTTCGCGGCTGCAAACGCCATCATCGACGCCCTTTGTGGTCATTTAGCTCAGCTCGGAGACGTCTCTTGTGACTATAACTCCGTGTTCACAGCAATTCATCGTCGTCGACTTAACTGGATCCCAATACTGCAGATGCAGAAATATGACTCCATAGCTGAGGTGACGTTGGAGCTCCGCAAGGTGGCGGAGAAGATAGGCGAGACTAAGGAAATCGGGGGAGATGAAGGAAGGATTGAGGATTCGGGGAATCAATTGGATGAGGAAAAGAAAATCGAAGAGAAGAGAACGGAGAATAATGTGAATTCTGAAGGCGAAGAATGTCCTGAAGAGTATGAATCGCCCAACAGTGAAATTACTGATTCAGGAAAGCAAGAAATGCAAGGAAGTTCGATGAACATTAATATATGTTCAAATCATGAAGCATGCGAAGGACGTTCTTCACAGATAACGTCGAGGAAAGGTTTTCAGGCGAAGGAGACAGTGAGAGGGCATATGGTCAATGTTGTGAAGGGATTGAAGCTATACGAGGACATTTTCACCGATTCTGAACTCAGCAAGCTCACTGATTTTGTCAATGAGCTTCATGCTGCTGGCCAGAATGGAGAACTCTCTGGAGAAACTTTTATACTATTTAACAAGCAAATGAAGGGTAACAAACGAGAGATGATTCAGCTGGGCGTGCCAATTTTTGGACAGATAAAGGAGGATTCAAACAGCAATATAGAGCCAATTCCATCTCTCCTCCAAAGTGTCATTGATCACCTTATCCAATGGCGTTTGCTTCCCGAATACAGAAAGCCAGATGGCTGTATCATTAACTTTTTCGAAGAGGGGGAGTATTCTCAGCCATTCCTGAAACCACCACACCTGGATCAACCTCTGTCCACTCTTCTTCTTGCTGAATCAACTATGGCTTTTGGGCGTACCCTTGTGAGCGAAAATGATGGGAACTACAAAGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTCTGGTGATGAGAGGAAACAGTGCTGACATGGCGAGGCACGTCATGTGTCCATCCCCAAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGACCAGACTCCAATCAATGGCAATCACCAACTCCTTCAATGATGAATGCCATGACTTTCTGGAAACCTGGAATTTCTGGACCATACGCGTTGCCAAGTGTACCTCCCAGTGGGCCCGAGGCAACGGGAATGATGCCCAAATGGGGAATTATCCGAGCTCCAATGGTGATGTTAGCCCCTGTGAGCCCTCGAAAATTGGCTAGCGGCGGAGGAACTGGGGTATTCTTGCCCTGGAATGTGCCATTCAGAAAACCTGCAAAGCATCTTCCACCACGTGCCCAGCGAGGACGACTTCTGGCATTACCTTCCTCAGTTGGATCACACACATCAGACTCGTCTTCTGAACCCAGCATTAGTGCTTGA 1575 0.4762 MTTAPVPPTIDRVLPAGTTMLPMQPPPLFISDSFAMISWFRSEFAAANAIIDALCGHLAQLGDVSCDYNSVFTAIHRRRLNWIPILQMQKYDSIAEVTLELRKVAEKIGETKEIGGDEGRIEDSGNQLDEEKKIEEKRTENNVNSEGEECPEEYESPNSEITDSGKQEMQGSSMNINICSNHEACEGRSSQITSRKGFQAKETVRGHMVNVVKGLKLYEDIFTDSELSKLTDFVNELHAAGQNGELSGETFILFNKQMKGNKREMIQLGVPIFGQIKEDSNSNIEPIPSLLQSVIDHLIQWRLLPEYRKPDGCIINFFEEGEYSQPFLKPPHLDQPLSTLLLAESTMAFGRTLVSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQWQSPTPSMMNAMTFWKPGISGPYALPSVPPSGPEATGMMPKWGIIRAPMVMLAPVSPRKLASGGGTGVFLPWNVPFRKPAKHLPPRAQRGRLLALPSSVGSHTSDSSSEPSISA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1934 524 MobiDBLite consensus disorder prediction 491 524 - -
Alju01g1934 524 Gene3D - 197 413 IPR037151 -
Alju01g1934 524 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 309 406 IPR005123 -
Alju01g1934 524 MobiDBLite consensus disorder prediction 507 524 - -
Alju01g1934 524 SUPERFAMILY Clavaminate synthase-like 204 405 - -
Alju01g1934 524 MobiDBLite consensus disorder prediction 115 145 - -
Alju01g1934 524 MobiDBLite consensus disorder prediction 115 167 - -
Alju01g1934 524 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 35 509 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1934 Alju-ChrAlju01 15937485 15941998 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1934 01 15937485 15941998 Alju03g2914 03 54565226 54569343 CCT
Alju01g1934 01 15937485 15941998 Alju01g1934 01 15937485 15941998 ECH