Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2853 ATGGCGGGAAAAGGTGGGAAGGGTCTTCTTGCTGCGAAAACCACAGCCGCTAACAAGGACAAAGATAAGGATAAGAAAAAGCCGGTTTCCCGTTCATCCCGTGCCGGAATCCAGTTTCCAGTGGGACGTATTCATAGGCAGCTGAAACAAAGGATCCAAGCGAATGGTCGTGTTGGTGCCACTGCTGCAGTTTATTTGGCGTCAATTCTGGAATATCTGACGGCAGAAGTTCTTGAGCTTGCTGGAAATGCGAGCAAGGATCTGAAGGTGAAGAGGATCACGCCTAGGCACTTGCAATTGGCCATAAGAGGAGACGAAGAGCTGGACACTCTGATTAAAGGGACCATTGCTGGTGGAGGAGTTATCCCTCATATCCACAAATCCTTGATCAACAAAACTGGCAAAGAATGA 411 0.4842 MAGKGGKGLLAAKTTAANKDKDKDKKKPVSRSSRAGIQFPVGRIHRQLKQRIQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTGKE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2853 136 SUPERFAMILY Histone-fold 13 113 IPR009072 GO:0046982
Alju03g2853 136 PRINTS Histone H2A signature 113 131 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 PRINTS Histone H2A signature 57 72 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 PRINTS Histone H2A signature 27 49 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 PRINTS Histone H2A signature 86 100 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 PRINTS Histone H2A signature 72 85 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 MobiDBLite consensus disorder prediction 1 36 - -
Alju03g2853 136 Pfam Core histone H2A/H2B/H3/H4 15 104 IPR007125 GO:0003677
Alju03g2853 136 FunFam Histone H2A 15 136 - -
Alju03g2853 136 Pfam C-terminus of histone H2A 106 135 IPR032454 -
Alju03g2853 136 CDD H2A 28 132 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 SMART h2a4 16 136 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 Gene3D Histone, subunit A 15 136 IPR009072 GO:0046982
Alju03g2853 136 PANTHER HISTONE H2A 22 132 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju03g2853 136 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2853 Alju-ChrAlju03 54115315 54116477 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1823 01 14821180 14822665 Alju03g2853 03 54115315 54116477 CCT