Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1823 ATGTTTTTTGAAAATTGGAATTTGGAATTGGGAAAAATTTTCCCACGCAAGATTGAGCGCCATTTCTATAGATTTGGCAGATTCAAAAAATTTGAAGCTATTAGCATCTGTCCCGTCCACCCTCATCTGGCAATTGGCGTACTCTTGCTATTGGCTGCCCAACTGCTCCTCTCGCTTCTGTGGCTTCTAGGCTCTCAAACTCTGGCAATGGCGGGAAAAGGAGGCAAGGGGCTTTTGGCTGCAAAAACCACAACTGCTAACAAGGACAAAGATAAGGATAAGAAAAGGCCTGTTTCCAGGTCATCCCGTGCCGGAATCCAGTTTCCTGTGGGTCGTATTCATAGACAGCTGAAACAAAGGATCCAAGCAAATGGGCGTGTTGGGGCTACAGCTGCAGTTTACTTGGCCTCCATTCTTGAATACCTCACAGCCGAGGTTCTGGAACTTGCTGGAAACGCAAGCAAAGATCTGAAGGTGAAGAGGATCACACCAAGGCATCTGCAACTTGCTATCAGAGGAGATGAAGAACTTGATACCCTTATTAAGGGCACCATTGCTGGTGGGGGTGTTATCCCTCACATTCACAAGTCCCTCATCAACAAGACCTCCAAAGAATGA 618 0.466 MFFENWNLELGKIFPRKIERHFYRFGRFKKFEAISICPVHPHLAIGVLLLLAAQLLLSLLWLLGSQTLAMAGKGGKGLLAAKTTTANKDKDKDKKRPVSRSSRAGIQFPVGRIHRQLKQRIQANGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1823 205 Gene3D Histone, subunit A 84 205 IPR009072 GO:0046982
Alju01g1823 205 PRINTS Histone H2A signature 182 200 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 PRINTS Histone H2A signature 96 118 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 PRINTS Histone H2A signature 126 141 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 PRINTS Histone H2A signature 155 169 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 PRINTS Histone H2A signature 141 154 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 Pfam Core histone H2A/H2B/H3/H4 85 173 IPR007125 GO:0003677
Alju01g1823 205 CDD H2A 96 201 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 SMART h2a4 85 205 IPR002119 GO:0000786|GO:0003677|GO:0030527
Alju01g1823 205 Pfam C-terminus of histone H2A 175 204 IPR032454 -
Alju01g1823 205 FunFam Histone H2A 84 205 - -
Alju01g1823 205 SUPERFAMILY Histone-fold 61 182 IPR009072 GO:0046982
Alju01g1823 205 PANTHER HISTONE H2A 90 201 IPR002119 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1823 Alju-ChrAlju01 14821180 14822665 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1823 01 14821180 14822665 Alju03g2853 03 54115315 54116477 CCT