Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2735 ATGGAGCTAGTGTTGGAGCTTGCGCGCTCCAAGGACACGAAGGAGCGGATGGCCGGCGTGGAGCGCCTTTATCAACAATTGGAAGCTTCGAGAAAGAGCCTCACTTCATCTGAGGTTACTTCCCTTGTTGACTGTTGTTTGGATCTTTTGAAGGATAGCAACTTCAGGGTCTCTCAGGGCGCCCTTCAAGCTCTGGCCTCTGCTGCCATTCTATCAGGTGATCATTTCAAACTTCATTTCGATGCGCTTGTTCCCGCCGTCGTTGACCGCTTAGGCGATGGGAAGCAGCCAGTTCGTGACGCTGCTAGAAGACTCTTGCTCACTCTTATGGAGGTTTCTTCCCCTACAATAATTGTTGAAAGAGCAGGATTCTTTGCTTGGACACACAGAAGCTGGAGAGTTAGAGAGGAGTTTGCTCGTACAGTCACATCTGCAATTGGTCTATTTGCGTCTACTGAGCTTACCCTTCAACGTGCTATTCTTCCTTCACTTTTGCAGTTGCTAACTGATGCAAATCCTGGTGTTAGAGAAGCAGCTATTTCGTGCATCGAGGAGATGTATGCACAAGCTGGTCCTCAATTTCGCGATGAACTTCAGCGCCACAACCTTCCTTCTTCTTTGGTGAAAGATATTAATGCCAGGTTAGAGGGCATTCAACCAAAAGTACATTCTTCTGATGGCATACCTGGTGGTTTTGTTGCTGGAGAAATTAAACCTTTAAGCTTTACTTCCAAGAAAAGCAGCCCAAAAACTAAAAGTTCATCAAGGGAAAACTCTATTTTTGCAGGAAATGGTGATGTTACCGTAGATTCTATCAAGGTTTACTCAGAGAAGGAGTTGATCAGAGAAATTGATAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTACTCTGCAGAGAGTTGAGGGGCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTTCGAGGACTCCTGAAGCAACTTGTTGGACCTTTAACCACTCAATTATCAGATCGAAGGTCCAGCATTGTGAAGCAGGCTTGCCATTTGTTGTGCTTTTTGTCAAAAGAACTCCTTGGTGGTTTTGAAGCTTGTGCTGAAATGTTCATACCTGTCCTTTTTAAGCTAGTTGTGATCACTGTCCTGGTAATTGCAGAGTCTGCAGATAACTGCATAAAGACGATGTTATGTAACTGCAAAGTTGCTCGAGTGCTTCCTGGTATAGCAGATTATGCAAAGAAGGATCGCAGTGCAGTACTTCGTGCAAGGTGTTGTGAATACGCTCTTTTGATATTGGAGCAATGGCCTGATGAACCAGAAATACAGCGCTCAGCTGATTTATATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGTTATAGACTATTTGCAAAAACATGGCCTGAACGTTCCTGTCGCCTATTTTCATCCTTTGATCCAGTTATTCAGAGGTTAATAAATGAAGAGGATGGAGGAGTACATAAGCGCCATGCTTCACCTTCCATTCGTGACAGAGTTGCACTGGTGTCGTTAACTAGCCAAGCCTCTGCTCCTTCTAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGGAGTTCAAATTTATCGTCAGGGACATCTGTGTCCTCTGGTTTACTTCTTTCACAGGCAAAATCACTCGGTAAAGGTGCAGAACGTAGTTTGGAAAGTGTGTTGCATTCTAGCAAACAGAAGGTCACTGCCATTGAAAGCATGCTCAGGGGCTTGGATTTGTCTAATAAGCACAATTCTGCTTTCCGGTCATCCAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATAATCTGACAAACTCCTTTACAACAGAATCAATTGTATCCGGTGTCAATAAAGGTAGTAACCAAAATGGTGGTTTGGGTCTGTCTGACATAATTTCACAAATTCAAGCTTCCAAAAACTCCAGTAAGGTATCATATAATAGTAATGCTAGTATTGGGCCTTCGTCAGCACTTTCATCATACTCAAATAAAGGGGCTTCTGAAAGATTACAAGAAAGAAATTCTATTGATGACAACGGCAACAATAGGGAGGCTAGGTGGGCTGTGAACCACCGCATTGATAGGCAGTGTTTGGATACTCCTTTTAGAGAAGCAAACTTTAGGGATTCACAGAGTAGTTATGTGCCTAATTTCCAGAAGCCGCTGGTGAGAAAGAATGTAGCTGGGCGTATCTCTGCTGGACAGAGGAGAAGTTTCGATGATAACCAACTCTCTCTCAGGGAGGTGTCAAATTATGCAGATGGACTGGTGTCTCTCCCTGAAGCTCTGAGTGAAGGGCTTAGTTCAGGTTCTAACTGGTCTGCTAGGGTTGTTGCTTTTAATTATCTTCACACCTTGTTACAGCAAGGTCCAAAGAGAATTCAGGAAGTGATCCAGAATTTTGAAAAGGTAATGAAGTTGTTTTTTCAGCACTTAGATGATCCTCACCATAAAGTTGCACACGCTGCTCTTTCAACACTTGCGGACATTGTTCCAGCATGCCGAAAGCCCTTTGAGAGTTATATGGAAAGAATACTACCACATGTGTTTTCTCGGTTAATTGACCCGAAAGAACTTGTCAGGAAAACATGCTCAATGACATTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCTCTTTTACCTGCATTACTACGCTCACTCGATGAACAAAGGTCTCCTAAGGCAAAATTGGCTGTTATTGAGTTTGCAATCACTTCCTTAAACAAGCATTCACTGAATTCAGAAGGTTCTGTCAATACTGGCATTCTGAAATCATGGCTTACCAAGTTAACTCCTTTGGTTCATGACAAAAATACAAAGCTTAGAGAAGCGGCCATTACGTGCGTTATATCAGTATACTCTCACTTTGATTCAGCTGCACTTCTAAATTTTATCCTTAGTTTGTCTGTTGAAGAACAGAATTCATTGAGACGAGCCCTTAAACAATACACTCCCCGCATTGAAGTGGACCTAATAAACTATTTGCAGATCAAGAAGGAGCGACAACGCTCCAAGTCTTCATATGATCCATCTGAGGTTGGACCATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAGGCTAGCTACCTTGGAAGGTATGCTGGTTCTCTTGATGGTGATGGTGGTAGGAAGTGGAGCTCCCATGATTCAACTCTGGTTAAAGCCAGTTTTTGCCAAGCAGCTTCTGGTGAAAATCAGGAACATTCATATCAAAATCATGAAACTGATTCTACTAGTGGTATTCTTGATTCAAAGACTAGAGATCTTGTTTATGCAGTCAATTCAATGGGCCAAAATTTTGGCCCTCATAATAGTCAACTCAGACATTCAGATGGTAGCATGGACTTTGAGGGCCTATCAGCTCCCCATCTGGAGGTTAACGGTCGGATGTCCTTAGAACATTTAAATTTAAATGGAGACTTTGGTCATGAAAAAGATCCTCCTGAATTGGACCTTGATCATCACTCAACTGAAGTCGTGAAGAATAACTCTAAAGATTCAGAGCCTGGCATTCCTCAAATTCTTCATCTGATCTGCAATGGGGGTGATGGAAGTCCTAGTTCAAGCAAGCGGACTGCACTTCAACTGTTAATTGAAGTTTCTACAGAAAATGACCGTTCTATTTGGACAAAGTACTTCAATCAGATTCTGACAGCTGTGCTTGAAGTGTTGGATGATTCAGACTCCCCAGTTAGAGAGCTTGCTCTCTCGGTTGTAGTTGAAATGTTAAAAAACCAGAAAGATGCCATGGAAGAGTCAGTTGAGATTGTTATTGAAAAGCTGCTTCATGTTGCAAATGATACTGTCCCCAAGGTCTCAAATGAAGCTGATCACTGCCTGACTATTGTTTTGTCTCAGTGTGATCCATTCAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACTGAAGATGAGAAAAGTCTTGTTACTTGTATAAATTGCTTGACGAAGCTTATTGGCCGGCTTTCTCAGGAGGAATTGATGGTTCAGTTACCCTCCTTTCTGCCTCCTCTTTTTGATGCTTTCGGAAACCAGAGTGCTGATGTTCGTAAGACAGTTGTGTTCTGTCTTGTGGATATATACATCATGCTCGGGAAAGCATTCTTGCCATACCTCGAAGGTCTAAATAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAGGCCAGGACAGGCATGCCCATTGACGCCACTCAATGA 4314 0.4279 MELVLELARSKDTKERMAGVERLYQQLEASRKSLTSSEVTSLVDCCLDLLKDSNFRVSQGALQALASAAILSGDHFKLHFDALVPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGFFAWTHRSWRVREEFARTVTSAIGLFASTELTLQRAILPSLLQLLTDANPGVREAAISCIEEMYAQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVHSSDGIPGGFVAGEIKPLSFTSKKSSPKTKSSSRENSIFAGNGDVTVDSIKVYSEKELIREIDKIASTLVPEKDWSIRIATLQRVEGLVLGGAADYPCFRGLLKQLVGPLTTQLSDRRSSIVKQACHLLCFLSKELLGGFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLCNCKVARVLPGIADYAKKDRSAVLRARCCEYALLILEQWPDEPEIQRSADLYEDLIRCCVSDAMSEVRSTARMCYRLFAKTWPERSCRLFSSFDPVIQRLINEEDGGVHKRHASPSIRDRVALVSLTSQASAPSNLPGYGTSAIVAMDRSSNLSSGTSVSSGLLLSQAKSLGKGAERSLESVLHSSKQKVTAIESMLRGLDLSNKHNSAFRSSSLDLGVDPPSSRDPPFPAAVPASNNLTNSFTTESIVSGVNKGSNQNGGLGLSDIISQIQASKNSSKVSYNSNASIGPSSALSSYSNKGASERLQERNSIDDNGNNREARWAVNHRIDRQCLDTPFREANFRDSQSSYVPNFQKPLVRKNVAGRISAGQRRSFDDNQLSLREVSNYADGLVSLPEALSEGLSSGSNWSARVVAFNYLHTLLQQGPKRIQEVIQNFEKVMKLFFQHLDDPHHKVAHAALSTLADIVPACRKPFESYMERILPHVFSRLIDPKELVRKTCSMTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAITSLNKHSLNSEGSVNTGILKSWLTKLTPLVHDKNTKLREAAITCVISVYSHFDSAALLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQIKKERQRSKSSYDPSEVGPSSEDGYVGFSRKASYLGRYAGSLDGDGGRKWSSHDSTLVKASFCQAASGENQEHSYQNHETDSTSGILDSKTRDLVYAVNSMGQNFGPHNSQLRHSDGSMDFEGLSAPHLEVNGRMSLEHLNLNGDFGHEKDPPELDLDHHSTEVVKNNSKDSEPGIPQILHLICNGGDGSPSSSKRTALQLLIEVSTENDRSIWTKYFNQILTAVLEVLDDSDSPVRELALSVVVEMLKNQKDAMEESVEIVIEKLLHVANDTVPKVSNEADHCLTIVLSQCDPFRCLSVIVPLLVTEDEKSLVTCINCLTKLIGRLSQEELMVQLPSFLPPLFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGMPIDATQ 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2735 1437 SMART TOG_3 1197 1430 IPR034085 -
Alju03g2735 1437 SMART TOG_3 279 510 IPR034085 -
Alju03g2735 1437 SMART TOG_3 777 1026 IPR034085 -
Alju03g2735 1437 SMART TOG_3 2 224 IPR034085 -
Alju03g2735 1437 Gene3D - 1221 1428 IPR011989 -
Alju03g2735 1437 Gene3D - 1 223 IPR011989 -
Alju03g2735 1437 PANTHER CLASP 32 1424 - -
Alju03g2735 1437 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Alju03g2735 1437 MobiDBLite consensus disorder prediction 675 714 - -
Alju03g2735 1437 Gene3D - 793 1017 IPR011989 -
Alju03g2735 1437 Gene3D - 264 504 IPR011989 -
Alju03g2735 1437 Coils Coil 1274 1294 - -
Alju03g2735 1437 MobiDBLite consensus disorder prediction 675 701 - -
Alju03g2735 1437 MobiDBLite consensus disorder prediction 608 633 - -
Alju03g2735 1437 SUPERFAMILY ARM repeat 2 399 IPR016024 -
Alju03g2735 1437 FunFam Protein peg1 266 510 - -
Alju03g2735 1437 Coils Coil 10 30 - -
Alju03g2735 1437 Pfam CLASP N terminal 57 188 IPR024395 -
Alju03g2735 1437 Pfam CLASP N terminal 282 497 IPR024395 -
Alju03g2735 1437 Pfam CLASP N terminal 801 993 IPR024395 -
Alju03g2735 1437 SUPERFAMILY ARM repeat 314 1428 IPR016024 -
Alju03g2735 1437 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2735 Alju-ChrAlju03 53207556 53218796 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1653 01 13267777 13279408 Alju03g2735 03 53207556 53218796 CCT
Alju03g2735 03 53207556 53218796 Alju03g2735 03 53207556 53218796 ECH