Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1653 ATGGAGGAAGCGCTGGAACTTGCGCGCACCAAGGACACCAAGGAGAGGATGGCCGGGGTGGAGCGCCTTCATCAACTTCTTGAAGCTTCCAGAAAGAGCCTCACTTCATTCGAAGTTACATCCCTCGTCGATTGTTGCATGGATCTCTTGAAAGACAACAACTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCACTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATGCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTTTCGTCTCCAACAATAATTGTGGAAAGAGCTGGTTCTTTTGCCTGGACACATAAAAGCTGGAGAGTCCGAGAGGAGTTTGCACGGACCGTTACCTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGCTATTCTTCCTTCAATTTTGCAGTTGCTCAATGATCCAAACTCTGGTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCCGGACCTCAATTTCGTGATGAACTTCACCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCCAGGCTTGAGGGCATTCAGCCTAAAGTTCGCTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAAATTAAGCCTTTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACATCACTTTTTGGAGGAGAAGGTGATCCCACAGAGAGACCCATTGATCCTGTCAAGGTCTATTCAGAAAAGGAGTTGATCAGGGAAATTGAAAAGATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCAAGTTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGTGTGCAATTATCTGATAGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCAAAGGAACTCCTGGGTGATTTTGAACAATGTGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGTAATTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGAATGTGCAAAAAATGATCGCAATGCTGTACTTCGTGCTAGGTGTTGTGAATATGCTCTTTTGATATTAGAACATTGGCCTGATACTCCAGAAATACAGCGATCAGCTGATTTATATGAGGATTTGATAAAGTGTTGTGTATCTGATGCAATGAGTGAGGTTCGGTCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTTCCGCCGCCTATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACATAGGCGGCATGCCTCACCTTCCGTTCGTGATAGAGGTGCATTGCTGTCATTAAGTAGTCAAGCTTCTGCTCCCTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGCTCAAGTTTATCATCAGGGGCATCTGTTTCCTCTGGTATTACTCAGGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGCTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCTCAGCTATTGAAAGCATGCTAAGAGGTTTGGATTTATCTGATAAGCACAATTCATCAGCCTTCCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCGTCTCGTGATCCACCATTTCCTGCTGCTGTCCCAGCATCTAATCACTTGACAAGCTCTGCAACTACAGAATCAACTGCTTCTGGGGTCATTAAAGGTACTAATCGAAATGGTGGTTTGGGTTTGTCTGATATAATCACTCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTAGCACATCATGGTAATGTTACTATGGAGCCTTTGTCAGCACTTTCATCATACTCCAGTAAAAGGGCTTCTGAAAGGCTTCAAGATAGAAGCTCTATTGATGACAACAGTGACATTAGGGAGGCTAGGCGGTTTATGAACCCCCACCTTGATAGGCAGTATATGGATGCAACTTATAAAGACGGAAATTTTAGAGATTCACAAAATAGTCATGTGCCTAATTTCCAGAGACCATTGTTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTATCACTTGGAGAGTCGTCCAATTATACAGATGGACCAGCATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCATTCCTTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAAAAGGTAATGAAGCTTTTTTTTCAGCACTTGGATGACCCACACCATAAAGTTGCACAGGCTGCTCTTTCAACGCTTGCTGATATCATTCCAGCATGTCGAAAGCCCTTTGAGAGTTACATGGAAAGAATACTACCTCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAGCCTAGCTCAATGACTTTGGAAATTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTGCCTGCGTTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAAGCAAAGTTGGCTGTTATAGAATATGCAATCAGCTCCTTTAACAAGCACTCAATGAATCCTGAAGGTGCTGCTAATATTGGCATCCTGAAATTATGGCTTGCCAAGTTAGCACCATTGGCTCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTATTACAGTCCTGAATTTCATCCTTAGTTTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATACACTCCTCGCATTGAGGTAGACTTGATAAACTTTTTACAGAGCAAAAAAGATAGGCAGCGCTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGGTGTGTTGGTGTTTCGAGGAAAGCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATAGCGATGGTGGTAGGAAGTGGAGTTCCCAAGACTCGACCCTTGTTAAACCCAGCCTCAGCCAAGCAGCTTCTGGTGAAATTCAGGAATTTTTGCATCATAATCATGAGATTGATTTTAATAAGGGTAGTCTTGATTCAAAAACTAAGGATCTTGCATCCACAGTCAATCCAATAAGCCAAAATGTGGGCCCTCAAACTAGTCAACTTGGGCACGTGGACAGTAGCATTAACTTTGAGGGTCTTTCAACTCCCCGTCTGGATGTAAATGGTCTGATGTCTGTAGAACATTCAAATGTTACTGAAAGCTTTGGAGATGAAGAACATCCTTCTGAATTGGACCATAATCATCACTTCGCAGAAAATATGAACATTAACTCTTTGACCGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGGTATCCAGTGGGGGTGATGGAAGCTCTGTTTCAAGCAAGAGGACTGCACTTCAACAGTTGGTTGAAGCTTCTAGAGCAAACGATCATTCTATTTGGACTAAGTATTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAGATGCTCAAAAACCAGAAAGAGGCCATGGAAGATTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTTAGTAAGGATAATGATCCCAAGGTCTCAAATACAGCGGATCACTGCCTGACGATTGTTTTATCTCGATATGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAACTGCTTGACAAAGCTTTTGGGCCGACTCTCTCAGGAGGAATTGATGGCTCAGTTGCCTTCATTTCTGCCTGCGCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGTAAGACTGTTGTTTTTTGTCTGGTGGATATATATATTATGCTGGGGAAAGCATTCTTGCCATACTTGCAAGGGCTGAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATTTCACAAGCCAGGACAGGAGTGGCTATTGATGCCACCCAGGAGTAG 4332 0.4298 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSFEVTSLVDCCMDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPSILQLLNDPNSGVREAAILCIEEMYAQAGPQFRDELHRHNLPSSMVKDINARLEGIQPKVRSSDGIGSGFIAGEIKPLGVNPKKSSPKAKSSSRETSLFGGEGDPTERPIDPVKVYSEKELIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIAECAKNDRNAVLRARCCEYALLILEHWPDTPEIQRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERFRRLFSSFDPVIQRLINEEDGGIHRRHASPSVRDRGALLSLSSQASAPSSLPGYGTSAIVAMDRSSSLSSGASVSSGITQAKSLGKGTERSLESVLHASKQKVSAIESMLRGLDLSDKHNSSAFRSSSLDLGVDPPSSRDPPFPAAVPASNHLTSSATTESTASGVIKGTNRNGGLGLSDIITQIQASKDSGKLAHHGNVTMEPLSALSSYSSKRASERLQDRSSIDDNSDIREARRFMNPHLDRQYMDATYKDGNFRDSQNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLSLGESSNYTDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANIGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSITVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQRSKSSYDPSDVVGTSSEEGCVGVSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLVKPSLSQAASGEIQEFLHHNHEIDFNKGSLDSKTKDLASTVNPISQNVGPQTSQLGHVDSSINFEGLSTPRLDVNGLMSVEHSNVTESFGDEEHPSELDHNHHFAENMNINSLTDTGPSIPQILHMVSSGGDGSSVSSKRTALQQLVEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKNQKEAMEDSVEIVIEKLLHVSKDNDPKVSNTADHCLTIVLSRYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKLLGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQE 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1653 1443 PANTHER CLASP 38 1429 - -
Alju01g1653 1443 Gene3D - 1224 1433 IPR011989 -
Alju01g1653 1443 Gene3D - 1 221 IPR011989 -
Alju01g1653 1443 MobiDBLite consensus disorder prediction 243 272 - -
Alju01g1653 1443 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Alju01g1653 1443 FunFam Protein peg1 266 513 - -
Alju01g1653 1443 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Alju01g1653 1443 SUPERFAMILY ARM repeat 290 1433 IPR016024 -
Alju01g1653 1443 SUPERFAMILY ARM repeat 5 402 IPR016024 -
Alju01g1653 1443 MobiDBLite consensus disorder prediction 633 651 - -
Alju01g1653 1443 SMART TOG_3 3 224 IPR034085 -
Alju01g1653 1443 SMART TOG_3 779 1028 IPR034085 -
Alju01g1653 1443 SMART TOG_3 270 514 IPR034085 -
Alju01g1653 1443 SMART TOG_3 1199 1435 IPR034085 -
Alju01g1653 1443 Gene3D - 267 506 IPR011989 -
Alju01g1653 1443 Pfam CLASP N terminal 60 188 IPR024395 -
Alju01g1653 1443 Pfam CLASP N terminal 801 990 IPR024395 -
Alju01g1653 1443 Pfam CLASP N terminal 284 500 IPR024395 -
Alju01g1653 1443 Gene3D - 795 1019 IPR011989 -
Alju01g1653 1443 Coils Coil 1279 1299 - -
Alju01g1653 1443 MobiDBLite consensus disorder prediction 247 261 - -
Alju01g1653 1443 MobiDBLite consensus disorder prediction 608 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1653 Alju-ChrAlju01 13267777 13279408 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1653 01 13267777 13279408 Alju03g2735 03 53207556 53218796 CCT
Alju01g1653 01 13267777 13279408 Alju01g1653 01 13267777 13279408 ECH