Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2705 ATGGAGTCTCTGGCCACACTGCATCACTGTCGCCCACCTCTTCGCTTGTCACTCCATCATCTTCCTCCTTCACTGTCAACTCCCATATCTTCCGTCTCCTTCAGGTCTCTACCACCCCGTGTTTCGCCGTCGCAACTCTCGTCTTCCTCTTTCAGATCATCGTCCATTAGAGCCGCATCATCGCCGTCAGAATCCTTCACTGACCCTACTTTCCGTAGACCTAGAACCACATTACCACAGTTGCTTCAAACCCTAAACTCCCTTTTCTCACCCGTCATCCGAACCACCTGCACCGTCATAGTAGCGGCTGTGCTTTTCTACACGCGTCTTCACCACAAGCCGGTCATTGCAGCCCCGCTCGAGACGCCCACGGTGGAGTCGATGGAAAATACTTCGAATGAAGAAAATCAAAGAGCTATTGATGAGAAATTGAGCAACAATCCCAATGATACCGACGCTCTTCGGTCGCTCATCGAGGTAAAGGTCAGGGCGCGCAAAATTGAGGAAGCAATCCAGGTTATAGACCGTTTAATTGAGCTCGAACCGGAAGAGTTTGAGTGGCCATTGCTGAAGGCTCACATGTATGTTTACAATGGTGACTACGAATTAGCTAAAGAGAAGTTCGAAGAAATTCTAACGAAAGATCCCTATCGTGTCGAGGCCTATCATGGCCTAGTAATGGCAACTTCGGAATCGGATAAGCCCTTGGAGGATTTGTCGAAGAGGGTTGAAGAAGCAGTGGAATTGTGCAAAAAGCAAAAGCGGGAATCGGAAGTCAGGGATTTGAGGCTTTTGATTGCGCAGATCAAAGTCATGGAGGGAGACCTTTCTGATGCTCTGAAGGCCTATCAGGAGCTTGTAAAGGAAGAACCAAAGGATTTCAGGCCTTACTTATGTCAGGGTATCATATATACTCTTCTAAGAAAGAAAGATGAAGCTGAAAAACAATTTGACAAGTTCCGGAGGCTTATCCCTAAGAACCATCCTTACCGGGAGTATCTTGAGGATAATATGTTTGAAATGAATGTAATTGCACAGAAGGCAGAGAGAGAGGGAGCCGGTGCAAAGAGCTGA 1074 0.4739 MESLATLHHCRPPLRLSLHHLPPSLSTPISSVSFRSLPPRVSPSQLSSSSFRSSSIRAASSPSESFTDPTFRRPRTTLPQLLQTLNSLFSPVIRTTCTVIVAAVLFYTRLHHKPVIAAPLETPTVESMENTSNEENQRAIDEKLSNNPNDTDALRSLIEVKVRARKIEEAIQVIDRLIELEPEEFEWPLLKAHMYVYNGDYELAKEKFEEILTKDPYRVEAYHGLVMATSESDKPLEDLSKRVEEAVELCKKQKRESEVRDLRLLIAQIKVMEGDLSDALKAYQELVKEEPKDFRPYLCQGIIYTLLRKKDEAEKQFDKFRRLIPKNHPYREYLEDNMFEMNVIAQKAEREGAGAKS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2705 357 MobiDBLite consensus disorder prediction 126 146 - -
Alju03g2705 357 SMART tpr_5 260 293 IPR019734 GO:0005515
Alju03g2705 357 SMART tpr_5 151 184 IPR019734 GO:0005515
Alju03g2705 357 SMART tpr_5 185 218 IPR019734 GO:0005515
Alju03g2705 357 SMART tpr_5 294 327 IPR019734 GO:0005515
Alju03g2705 357 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Alju03g2705 357 Pfam Tetratricopeptide repeat 270 325 - -
Alju03g2705 357 SUPERFAMILY TPR-like 144 329 IPR011990 GO:0005515
Alju03g2705 357 Coils Coil 236 256 - -
Alju03g2705 357 Gene3D Tetratricopeptide repeat domain 106 350 IPR011990 GO:0005515
Alju03g2705 357 ProSiteProfiles TPR repeat profile. 151 184 IPR019734 GO:0005515
Alju03g2705 357 MobiDBLite consensus disorder prediction 42 73 - -
Alju03g2705 357 PANTHER TRANSMEMBRANE PROTEIN 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2705 Alju-ChrAlju03 52986943 52988016 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1606 01 12896395 12897468 Alju03g2705 03 52986943 52988016 CCT
Alju03g2705 03 52986943 52988016 Alju03g2705 03 52986943 52988016 ECH