Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2524 ATGGATCGGCTTGCTTCCATCACTATTCTGCCAGACGCGTTTCAAGGGACCAGAAATGACATTTCCCTGCTAATTGGGTTGATTTGGAGTCAAATCAAGGTCCCATTGATCGTGCCGCTTCTGAGAATAGCAGTGGTTATATGCCTGATCATGTCCTTGCTGATGTTCATCGAGAGGGTGTACATGGGCGTCGTCATTACCTTGGTGAAACTATTCGGGCAAAAACCAGAGAAGCGTTACAAATGGGAGGCTATGAAGGACGACATAGAGCTGGGCAACTCAGCTTATCCAATGGTGCTTATTCAAATCCCAATGTACAACGAAAGAGAGGTATATCATCTGTCCATTGGAGCGGCTTGTGGGCTTTCTTGGCCTTCAGACAGGATCATAATACAAGTTCTAGACGATTCCACTGACCCGACGATTAAGAGCATGGTGGAGATGGAATGCCAGAGATGGGCGAGCAAGGGCATAAACATAAAGTACGAGATAAGGGACAACAGAAACGGGTACAAAGCAGGGGCTCTAAAAGAGGGCATGAAACGAAGCTACGTGAAGCAGTGCGACTACGTGGCCATTTTGGACGCCGATTTTCAGCCAGAGCCTGATTTCCTCTGGCGCACCGTCCCTTTCCTCCTCCACAATCCTCAACTCGCTCTTGTTCAGGCTCGCTGGAAGTTTGTGAATTCGGACGAGTGTTTGATGACAAGGATGCAGGAGATGTCGCTAGATTATCATTTTACGGTGGAACAAGAAGTAGGCTCTTCCACTTATGCCTTCTTCGGATTCAATGGGACTGCTGGAGTATGGAGAATCTCCTCTCTGAATGAAGCTGGTGGCTGGAAGGATAGGACCACTGTGGAAGATATGGACCTCGCTGTGAGAGCCAGTCTCAAAGGCTGGAAATTCCTCTACTTAGGCAGTTTAAAGGTTAGGAACGAACTGCCAAGCACTTGGAAGGCGTATCGCTACCAACAACATCGCTGGTCTTGTGGTCCGGCCAATCTTTTCAGGAAAATGGCATGGGAGATTATGACCAGCAGGAAAGTGTCCTTGTGGAAGAAGATACATGTGATCTACAGCTTCTTTTTCGTTCGGAAAGTTGTTGCCCACATCAACACATTCATATTCTACTGCATAGTATTGCCTGCAACTGTCTTGGTGCCTGAGGTCGTGGTCCCAAAGTGGGGAGCTGTATATATCCCTTCCATCATCACCCTTCTTAATGCAGTTGGAACTCCGAGGTCACTGCACTTACTAGTCTTTTGGATTCTGTTTGAGAATGTCATGTCTCTACATCGAACAAAGGCAACCATTATTGGTCTGCTAGAGGCAAGTCGAGTGAATGAGTGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAAGCTAAAGCAGGCACTAAAGCATCTAAGAAGCCTCGTTTGCGGATTGGAGACAGGGTTCACCTGTTAGAGCTTGGGGTTGGATTTTACCTCTTCTTCTGCGGCTGCTATGATTTCCTGTTTGGGAAAAACCATTACTTCGTATTCCTTTATATACAAGCAATTGCCTTCTTTATCATGGCCTTTGGATATGTTGGCACCTTTGTTCCCACCAACTCATAG 1605 0.4673 MDRLASITILPDAFQGTRNDISLLIGLIWSQIKVPLIVPLLRIAVVICLIMSLLMFIERVYMGVVITLVKLFGQKPEKRYKWEAMKDDIELGNSAYPMVLIQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSMVEMECQRWASKGINIKYEIRDNRNGYKAGALKEGMKRSYVKQCDYVAILDADFQPEPDFLWRTVPFLLHNPQLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISSLNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVRNELPSTWKAYRYQQHRWSCGPANLFRKMAWEIMTSRKVSLWKKIHVIYSFFFVRKVVAHINTFIFYCIVLPATVLVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKAGTKASKKPRLRIGDRVHLLELGVGFYLFFCGCYDFLFGKNHYFVFLYIQAIAFFIMAFGYVGTFVPTNS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2524 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 376 IPR029044 -
Alju03g2524 534 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 26 528 - -
Alju03g2524 534 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Alju03g2524 534 Pfam Glycosyltransferase like family 2 98 332 - -
Alju03g2524 534 CDD CESA_CaSu_A2 97 333 - -
Alju03g2524 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 312 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2524 Alju-ChrAlju03 51693615 51697590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2524 1 533 Miscellaneous Gene Families AT5G03760 80.712 0.0 928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3607 01 65286461 65290566 Alju03g2524 03 51693615 51697590 CCT
Alju03g2524 03 51693615 51697590 Alju10g0404 10 3218742 3222510 ECH
Alju03g2524 03 51693615 51697590 Alju03g2524 03 51693615 51697590 ECH