Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3607 ATGTCTCAAACAACAATGGATTATTCAGCTGCATCAGCATTAATGGGGATGGTGTGGGAGCAAACTAGGGTTGCAGTGATGGTTCCAGGGTTGAAGATGATGGTAAGAGTGTGCCTTGCTATGTCAGTGATGTTGTTTGTGGAGAGAGTGTATATGGGAATAGTGATACTGCTCGTTAAGTTCTTTGGACTCTGCAACCCTAACAAGTGTTACAATTGGGAGCCTCTTGTGCATGACGATGATGTTAATATTGATATTGATATTGAGCTTGGCAATTCCACTTATCCCATGGTCCTCGTTCAAATTCCAATGTACAATGAGATCCAGGTGTACAAGCTGTCGATAGGAGCAGCATGTGGGTTATCATGGCCGTCTAGTAGGATTATCATTCAAGTTCTGGATGACTCCGCTGATCCTCTCATCAAGGAAATGGTGAAGACAGAGTGCAAGAGTTGGGAGAGCAAAGGTATAAACATAAAGTATGAGATCAGAGAGAACAGAATAGGCTACAAAGCAGGAGCTCTTAAGCAAGGCTTGAAGCATCCCTATGTCCATCTCTGTGACTATGTTGCCATCTTTGATGCTGACTTCCAACCCCAACCTCATTTCCTCCTCCAAACCATCCCCTTCCTCATCCATAACCCTCAACTTGCCCTCATCCAAGCTCGCTGGACTTTCGTAAATGCTGATGAATGCCTAATGACAAGAATGCAAGAAATGTCATTAGATTACCATTTCAAAGTTGAGCAAGAAGTTGGATCCTCTACCTACGGTTTCTTTGGTTTCAATGGCACAGCTGGTGTCTGGAGGCTTTCAGCATTGAATGAGGCTGGAGGATGGCAGGACAGAACCACTGTGGAAGACATGGACTTGGCCGTCCGAGCCGGTCTCAAGGGCTGGAAATTTCTGTACCTTGGTGATCTTCAGGTGAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTATCAACAACACCGGTGGTCTTGTGGGCCAGCTAATCTCTTCAGGAAAATGGCAATGGAAATCATAAGAAACAAGAAAGTGACAATGTGGAAGAAGTTCTATGTGATTTATAGCTTTTTCTTAGTGAGAAAGATCATAGCTCATGTGGTGACATTTTTGTTCTACTGTGTCGTTCTGCCTGCAACTGTTCTTGTTCCTGAAGTGGAAGTTCCAAAGTGGGGTGCTGTATACATACCTTCCATCATTACTCTGCTTAATGCTGTAGGAACTACAAGGTCACTCCACCTATTGGTATTCTGGGTCCTATTTGAAAATGTCATGTCCATGCATCGGACTAAGGCAACACTCGTAGGTTTGCTGGAGGCAGGGAGAGCAAATGAATGGGTGGTCACTGAGAAATTGGGAGATGCTCTTAAAACAAAAGCAGGAGGCAAAGCACCAAGGAAGCCACGTGTCGCAATTGTTGATAGGAAAAAGGGAGAAAAGAAGCATACGCCACCTTGTGATTCCATAATTTTGTTGATCAGCAAAATGGAATTCTCAGTACTATATTCATATACATTCTACATTTCAGTGGAACTGTGA 1551 0.4358 MSQTTMDYSAASALMGMVWEQTRVAVMVPGLKMMVRVCLAMSVMLFVERVYMGIVILLVKFFGLCNPNKCYNWEPLVHDDDVNIDIDIELGNSTYPMVLVQIPMYNEIQVYKLSIGAACGLSWPSSRIIIQVLDDSADPLIKEMVKTECKSWESKGINIKYEIRENRIGYKAGALKQGLKHPYVHLCDYVAIFDADFQPQPHFLLQTIPFLIHNPQLALIQARWTFVNADECLMTRMQEMSLDYHFKVEQEVGSSTYGFFGFNGTAGVWRLSALNEAGGWQDRTTVEDMDLAVRAGLKGWKFLYLGDLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVTMWKKFYVIYSFFLVRKIIAHVVTFLFYCVVLPATVLVPEVEVPKWGAVYIPSIITLLNAVGTTRSLHLLVFWVLFENVMSMHRTKATLVGLLEAGRANEWVVTEKLGDALKTKAGGKAPRKPRVAIVDRKKGEKKHTPPCDSIILLISKMEFSVLYSYTFYISVEL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3607 516 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 13 477 - -
Alju01g3607 516 FunFam Glucomannan 4-beta-mannosyltransferase 9 87 315 - -
Alju01g3607 516 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 364 IPR029044 -
Alju01g3607 516 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 315 IPR029044 -
Alju01g3607 516 Pfam Glycosyl transferase family group 2 189 382 IPR001173 -
Alju01g3607 516 CDD CESA_CaSu_A2 96 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3607 Alju-ChrAlju01 65286461 65290566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3607 15 486 Miscellaneous Gene Families AT5G03760 73.093 0.0 733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3607 01 65286461 65290566 Alju03g2524 03 51693615 51697590 CCT
Alju01g3607 01 65286461 65290566 Alju10g0404 10 3218742 3222510 ECH
Alju01g3607 01 65286461 65290566 Alju01g3607 01 65286461 65290566 ECH