Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2383 ATGGATTCGGACGCGGTTCCATTTTCCAGCCAATCGGTAAAATGCTGTGACTGTGGGTGTAGATGTTCTTTGATAGCTGAATCTCCGGGGCCTTGGATTCGTTCCGTTAAACGGAAGCATGATGAGTTTGAACGGGGTAACCAATTGTTACTACCGGCCTTGAATTACTTTTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCGGCATTGCGCGAGATAGTTAGCAGACAACAAAAAACTATACAAGATTTATATGTTGAGTTGGAGGAGGAGAGAAATGCTTCAACGACAGCTGCAAATGAGGCCATGTCAATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGATTCAAATGGAAGCCCGACAGTTCAAGACTTTTGTGGAGGAGAAGATGGTGCATGATCGGGAGGAAGTTCTGGCATTTGAGGATTTGTTGTATAAAAGAGAACAAGCAATCGAGTCACTTACTTGTGAGGTGCAGGCTTATAAGCATAGGATGATGAGCTATGGGCTAACTGAATCTGAAGCAGATGGTAGGAGTCTGTATATGGAAGATCTTGACCCTGAATATGAACCTTCCATCAATGAATACCCTCCATTGAAGTGCAAGGTAAATGAAATGCATGCTGCCAGTGCGAGGGATGCTGATGATGTAGATGTTGAGAAATATGCATTTGGAGAAACCCCTCGTGAACGGTTGAGGAATTTGGAAAATAGGATCTCTCAAATGGAAAGGAATCCCCCTTATAGCCCGGTTGGTGGGGATGTTTCAGGAAAAAATATTCTAGAGAAGGTGATAGTCGGGCAGTCTCCTCGACCAAGTCAACATTCAAGGAAATTTTCTAGTGACTCTAGTACATTTGCTGGAATGGGTAGAGAGATGAGACCAGAATCTTTTATGGATTCTCCTAAACGTAGTACTTCCTTTCGGAAGATAGATCATATCTCACTGCCAGAGGATCCATCCAACTTGAAAAGGGCAGATAATGCATCGGAGGCTGGTGATGACACCTGTGATAGAGTTTATACCATTGACTCTATTCATAATGGGTCCCCATCTAACGGTTTTAAAGAGTCCAAACCTGTATCTGGTGTTTATGAAGATTATTCAACCACTCCGAGGGTAGATAATGTTTTTGGATATGAAGACCCCGACATTAAGAAGCTATACATGAGGCTTCAGGCCCTTGAGGCTGATAGGGAATCGATGAAGCAGGCAATCATTTCAACCAGTACTGATAAAGCACAGATGGTGTTATTGAGGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCCCAAAGAAAAAAGGCAGTGCAAAGGCCATCTGTTGGCAGATTTTCGTCAATGATTAAGACAATCACAGGTGTTTTTTCCTGGAGGAAGAAAGCACGCCAATGCAAGTATACGTTCGGGCAATCAGCCAACGGGGTCGGCTTGCAAACGCTTCTAGGTATTGGGCCTCGTGTAAAGCAGTGGAGATGTCTTTCAAGCACACAACTCAGAGTTTAG 1515 0.437 MDSDAVPFSSQSVKCCDCGCRCSLIAESPGPWIRSVKRKHDEFERGNQLLLPALNYFSVARVQIENECAALREIVSRQQKTIQDLYVELEEERNASTTAANEAMSMILRLQREKAEIQMEARQFKTFVEEKMVHDREEVLAFEDLLYKREQAIESLTCEVQAYKHRMMSYGLTESEADGRSLYMEDLDPEYEPSINEYPPLKCKVNEMHAASARDADDVDVEKYAFGETPRERLRNLENRISQMERNPPYSPVGGDVSGKNILEKVIVGQSPRPSQHSRKFSSDSSTFAGMGREMRPESFMDSPKRSTSFRKIDHISLPEDPSNLKRADNASEAGDDTCDRVYTIDSIHNGSPSNGFKESKPVSGVYEDYSTTPRVDNVFGYEDPDIKKLYMRLQALEADRESMKQAIISTSTDKAQMVLLREIAQHLCKEMSPQRKKAVQRPSVGRFSSMIKTITGVFSWRKKARQCKYTFGQSANGVGLQTLLGIGPRVKQWRCLSSTQLRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2383 504 Coils Coil 75 95 - -
Alju03g2383 504 Coils Coil 499 504 - -
Alju03g2383 504 PANTHER BNAANNG28530D PROTEIN 64 444 - -
Alju03g2383 504 MobiDBLite consensus disorder prediction 271 289 - -
Alju03g2383 504 Coils Coil 387 407 - -
Alju03g2383 504 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Alju03g2383 504 Coils Coil 100 120 - -
Alju03g2383 504 Pfam Zein-binding 70 160 IPR007656 -
Alju03g2383 504 MobiDBLite consensus disorder prediction 270 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2383 Alju-ChrAlju03 50555005 50557915 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1246 01 9739025 9741503 Alju03g2383 03 50555005 50557915 CCT
Alju03g2383 03 50555005 50557915 Alju03g2383 03 50555005 50557915 ECH