Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1246 ATGGATTCAGAACCAGCTCTATCTTCCACGAATTCAGTAAAATGTTGCAGCCGCGAATGTAGTTGCTCGTTGGCTGCTGATTCTCAAGCAACCTGGCTCCGTACTGTTAAGCGGAAGCTTGATGAGTTTGAACAGGATGGCAAGTTCTCTAGACCTGAGTTGGATAACTTTTCAGTTGCACGGGTCCAAATCGAAAATGAATGTGTAGCGTTACGTGAGACAGTTACTAGACAACAGCAAGCAATAGAAGATCTATGTGCTGAATTGGAGGAGGAGAGAAATGCTTCATCAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGATTGCAGAGGGAGAAAGCAGAGATTCAAATGGAAGCCCGGCAGTTCAAGCGTTTTGCAGAGGAGAAGACGTCACATGACCAGGAGGAGCTTTTAGCGTTGGAGGACATGTTGTATAAGAGAGAGCAGACAATACAAGCGCTTACATGTGAAGTTCAGGCTTATAAGCACAGGATGATGAGTTATGGCCTCACGGAATTAGAGGCAGCAGGTGAAAGGAACATGAACTTGGGGGAATTGGGTGATCAATATGAACTCCCCACCTATGACTACCCTCCTTTAAAATGCATTGGACATACTGCCATGGATGCTGAGAATGATGACACTGATATTGAGAAATATGCATTTGGTGAAACTCCTTCTGATCGATTGAGAAACTTGGAAAATAGAATCTCCCAAATGGAGAGAAGGTCTATTCATAACCAAGTGGATGGGGATTATACAGCGAAATTTAGTCTAGAGAAGGAGGTAGTTGGACATTCTCCAAGGCGGACTAGACATTCAAGAAAGATATCCAACGACTCAAGTTCATTTATAGTGGATTCTCCCAAGAGCTTTAGGAAGATGGATTGTGTCTCACAACCAGATGACCATTCCAATTTGAGAAGGGTAGATTTTGCATCAGAAGCTGGTGATGATATGGGTGATAGAGTTTATACTATTGACTCTGTTCATACGGGGACACCATGCAAAGGTTTTTCAGAGTCCAAATGTGGAGCTGTTTATGAAAATTATTCGACCGCCCCAATGGAGTCACTGAATCATGCTGATTTTGAAGATCCTGACATAAAGAAGCTTTACATGAGACTTCAAGCTCTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACATGTCTTGCTACTTAAGGAAATAGCTCAACATTTGTGCAGAGGGGGAATGTCACCACAAAGAAGAATGACAGTGAGGAAGCCACTTGTTGTTAGTAGTTTTTCATTCTTATCAATTTTTAAGTGGATGATATCGTTGGTTTTGTGGAGAAAGAAAGCTGGTCAAAGCAAGTATATGTTTGGTCTACCAGCCAATGGTGTGGGCTTACTAATGCTTTTGGACAAGAGGCCCCGTAGGAGGCCATGGAGATGCGTCTCAGTCACCCAGTTGGGAGATTAG 1479 0.4314 MDSEPALSSTNSVKCCSRECSCSLAADSQATWLRTVKRKLDEFEQDGKFSRPELDNFSVARVQIENECVALRETVTRQQQAIEDLCAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKTSHDQEELLALEDMLYKREQTIQALTCEVQAYKHRMMSYGLTELEAAGERNMNLGELGDQYELPTYDYPPLKCIGHTAMDAENDDTDIEKYAFGETPSDRLRNLENRISQMERRSIHNQVDGDYTAKFSLEKEVVGHSPRRTRHSRKISNDSSSFIVDSPKSFRKMDCVSQPDDHSNLRRVDFASEAGDDMGDRVYTIDSVHTGTPCKGFSESKCGAVYENYSTAPMESLNHADFEDPDIKKLYMRLQALEADRESMRQAIISMRTDKAHVLLLKEIAQHLCRGGMSPQRRMTVRKPLVVSSFSFLSIFKWMISLVLWRKKAGQSKYMFGLPANGVGLLMLLDKRPRRRPWRCVSVTQLGD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1246 492 Coils Coil 371 398 - -
Alju01g1246 492 Coils Coil 72 130 - -
Alju01g1246 492 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Alju01g1246 492 PANTHER BNAANNG28530D PROTEIN 61 431 - -
Alju01g1246 492 Pfam Zein-binding 70 160 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1246 Alju-ChrAlju01 9739025 9741503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1246 01 9739025 9741503 Alju03g2383 03 50555005 50557915 CCT
Alju01g1246 01 9739025 9741503 Alju01g1246 01 9739025 9741503 ECH