Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2357 ATGCTGACCGTGCTTCGCGTACACCTCCCCTCTGATATACCCATTGTAGGGTGTGAGCTCACGCCGTATGTGCTTATACAGCGACCAGACAAGCTTGTCACCAACGACGATGTCCCTGAGACGGCCCCCTTAGATGGCCATTTCTTGCGGTATAGGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAAGATGCCACACTGCAGTGTGTTGGCTGTGTTAAGGCCAAAATACCTGTTACCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCACCGTCTTTTACATGATCGTGCTGCAAGTGCAGTCAATGAAAATGGAACTGAAGAGGAGGAACTATTTGGACGCTATAATAGCACTGGCTCTGGGGCAGTTAATAACAGTTTATCCAGCTCTGCTTCAAGTGCTAGCTTGGCAAATGTGTCAGCTCCTCTGTATCCAGCTGCTGCTACACAACGAAGTGGTGGCGAAACTTGGATTGAAGTTGGACGATCTAAAACGTACACCCCAACGGCTGATGATGTTGGTCATGTCCTTAAATTTGAGTGCGTTGTAGTTGATACTGAGGCAAAAGTTCCTGTAGGGCATGCTAATACTATACTAACTTCTCGTGTTATTCCTGCTCCATCTCCTATCCCACGCCGTTTGATTCCTGTTGACGGGATGGCACATATAGACGCAGATGCACGCATAACATCTTCAGGAGCATTTACTGTTCTATCTTACAACATTTTGTCTGATGCATATGCTTCAAATGATTTATATAGTTACTGTCCTCCATGGGCTCTTTCTTGGCCATACCGCAGGCAAAATTTGTTAAGAGAAATAGTTGGTTACCGGGCGGATATTATTTGTCTTCAGGAGGTACAAAGTGATCATTATGAGGATTTTTTTGCTCCTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGTATTTGGCAGCAACACCAACACAGTTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTGAAGAAATACGAGGTTGAATTTAACAAGGCTGCGCAGTCTTTAACAGATGCTATGATTCCCACTGGCCAGAAGAAAGCTGCGTTAAATCGGCTGGTTAAGGACAATGTCGCTCTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCTAGTTGACAATCCTGGCAAAAGACAGCTTCTTTGTGTGGCAAATACGCATGTAAATGTGCACCAAGATTTAAAAGATGTTAAACTCTGGCAGGTGCACACACTCTTGAAGGGGTTGGAGAAAATTGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGAGTTTAATTCGGTTCCTGGAAGTGCTCCACATTCACTTCTTGCATTGGGGAAGGTTGACCAAACACATCCAGATTTAGCAGTTGATCCACTTAATATATTGCGGCCACACAACAAGTTGGTTCATCAATTGCCACTGGTCAGTGCATACTCATCCTTTGGAAGGATGGTAGGTCTTGGGTTTGAGCAGCACAGAAGGAGAGTGGATAGTGCAACAAATGAACCCTTGTTCACAAATGTCACTAGGGATTTTATCGGCACTCTTGATTACATATTTTATACAGCGGATTCATTGGTGGCGTTAACACTTGAAGATCTAAATACACAAAGAAAGGCTGAAAGAAGCATTTGGTTGATAAAGCTGCTTTAG 1740 0.4328 MLTVLRVHLPSDIPIVGCELTPYVLIQRPDKLVTNDDVPETAPLDGHFLRYRWYRVQSDKKVAVCSIHPSEDATLQCVGCVKAKIPVTKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRYNSTGSGAVNNSLSSSASSASLANVSAPLYPAAATQRSGGETWIEVGRSKTYTPTADDVGHVLKFECVVVDTEAKVPVGHANTILTSRVIPAPSPIPRRLIPVDGMAHIDADARITSSGAFTVLSYNILSDAYASNDLYSYCPPWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEDFFAPELDKHGYYGLYKRKTNEVFGSNTNTVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTGQKKAALNRLVKDNVALIVVLEAKVNNQLVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGEFNSVPGSAPHSLLALGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRMVGLGFEQHRRRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVALTLEDLNTQRKAERSIWLIKLL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2357 579 CDD Deadenylase_CCR4 252 555 - -
Alju03g2357 579 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 160 556 - -
Alju03g2357 579 Gene3D Endonuclease/exonuclease/phosphatase 222 572 IPR036691 -
Alju03g2357 579 Pfam Endonuclease/Exonuclease/phosphatase family 253 561 IPR005135 GO:0003824
Alju03g2357 579 SUPERFAMILY DNase I-like 248 555 IPR036691 -
Alju03g2357 579 FunFam Carbon catabolite repressor protein 4 1 219 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2357 Alju-ChrAlju03 50331911 50337547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1220 01 9531853 9537895 Alju03g2357 03 50331911 50337547 CCT
Alju03g2357 03 50331911 50337547 Alju03g2357 03 50331911 50337547 ECH