Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1220 ATGCTGAGCGTGCTACGCGTGCATCTCCCTTCTGATATACCTATTGTTGGATGTGAGCTTACGCCGTACGTGCTCCTACGGCGACCCGACAAGCCTGTTACCACCGACGATGTGCCAGAGTCAGCTCCAATAGACGGTCATTTCCTACGTTACAGGTGGTACCGTGTGCAAAGTGATAAAAAGGTTGCTGTCTGCAGCGTACATCCATCTGAACAGGCCACACTGCAGTGCCTTGGTTGTGTTAAAGCCAAAATAACTGTTTCGAAAAGCTACCATTGCACACCAAAGTGCTTTTCAGATGCATGGCAGCATCATCGTGTTCTCCATGATCGTGCTGCAAGTTCTGTTAATGAAAATGGGAATGAAGAAGAGGAGGAATTTGGTCGCTTTAATAGTTCTGGATCTGGGTTAGTCAATAATAGCTTATCTAGCTCTGCATCAAGTGTTGCTTTGGTAAATGGGTCAGCACATTTGTATCCTTCAGTTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATCAAAAACATATACCCCAACAATTGATGACATTGGTCATATCTTGAAATTTGAGTGTGCAGTTGTTGATGCAGAGACAAAACTTCCTGTGGGGCATGTCAACACCATACTAACCTCCCGTGTCATTCCTGCACCATCGCCTAGTCCACGCCACTTGATACCTGTTGATGGGATGGGACCTTTAGATGCTGATGGGCGTTTAACATCTTCAGGAACTTTTACCGTTCTGTCGTACAACATTTTGTCTGATGCATATGCCTCAAATGATTTATACAGTTACTGCCCTTCATGGGCTCTTTCTTGGCCCTATCGCAGGCAAAATTTGTTAAGAGAAATAGTTGGTTATCGTGCAGACATTATTTGCCTTCAAGAGGTCCAAAGTGATCATTATGAGGAATTTTTTTCTCCCGAATTGGACAAACATGGATATTATGGTTTATACAAGAGAAAAACAAATGAGGTATACGGTGGTAACAACAATACAATTGATGGCTGTGCAACATTTTTCCGCAGGGACAAATTTTCACATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCGCAGTCTTTGACAGATGCCATGATTCCAACTGCCCAGAAGAAAACCGCTTTAAATAGGCTTGTTAAGGATAATGTTGCACTTATAGTGGTTCTAGAAGCGAAAGTTGCCAATCAGCCAATTGATAATCCTGGGAAAAGGCAGCTTCTTTGTGTGGCTAATACACATGTAAATGTTCAGCAAGATCTGAAGGATGTCAAACTCTGGCAGGTGCACACTCTTTTAAAAGGGTTAGAAAAGATAGCTGCAAGTGCAGACATTCCAATGCTGGTTTGTGGAGATTTTAATTCGGTTCCTGGAAGTGCCCCTCATGCACTTCTTGCGATGGGGAAGGTAGAACCATTTCATCCTGATTTAACTGTTGATCCTCTCAATATCTTGCGTCCTTATGGCAAGTTGGTTCATCAGCTGCCACTGGTTAGTGCATACTCATCTTTTGCTAGAACAGCAGGTCTTGGTTTTGAGCAGCACAAAAGGAGACTGGACAGTGCAACAAATGAACCCTTGTTCACAAATGTCACTAGAGATTTTATTGGAACTCTAGATTACATCTTTTATACAGCGGATTCTTTAGTGGTGGAGTCACTATTGGAGCTATTGGACGAGGAGAGTTTGAGGAAAGACACGGCACTTCCTTCTCCTGAATGGTCCTCAGATCATATCGCTCTGTTAGCTGAGTTTCGTTGCTGCAAGAATAGATCTAGACGTTGA 1803 0.4298 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKPVTTDDVPESAPIDGHFLRYRWYRVQSDKKVAVCSVHPSEQATLQCLGCVKAKITVSKSYHCTPKCFSDAWQHHRVLHDRAASSVNENGNEEEEEFGRFNSSGSGLVNNSLSSSASSVALVNGSAHLYPSVVTQRSGGETWIEVGRSKTYTPTIDDIGHILKFECAVVDAETKLPVGHVNTILTSRVIPAPSPSPRHLIPVDGMGPLDADGRLTSSGTFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYGGNNNTIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTAQKKTALNRLVKDNVALIVVLEAKVANQPIDNPGKRQLLCVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPFHPDLTVDPLNILRPYGKLVHQLPLVSAYSSFARTAGLGFEQHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1220 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 160 593 - -
Alju01g1220 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Alju01g1220 600 FunFam Carbon catabolite repressor protein 4 1 219 598 - -
Alju01g1220 600 Coils Coil 594 600 - -
Alju01g1220 600 Gene3D Endonuclease/exonuclease/phosphatase 220 599 IPR036691 -
Alju01g1220 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
Alju01g1220 600 CDD Deadenylase_CCR4 252 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1220 Alju-ChrAlju01 9531853 9537895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1220 278 479 EF-hand Containing Proteins AT5G54130 24.766 6.61e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1220 01 9531853 9537895 Alju03g2357 03 50331911 50337547 CCT
Alju01g1220 01 9531853 9537895 Alju01g1220 01 9531853 9537895 ECH