Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2025 ATGGGTGCAAGTCGTAAACTGCAGGGTGAGATAGATCGTGTTCTGAAGAAGGTTCAAGAAGGCATTGAAGTCTTCGATAGCATCTGGAAGAAGGTTTACGATACTGACAATGTGAACCAAAAGGAGAAATTTGAGGCAGACCTGAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACGTGGATTCAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCCCTGGTGGATGCTCGCAAACTCATTGAGCGTGAAATGGAAAGATTTAAAATCTGTGAGAAGGAGACCAAGACCAAAGCTTTCTCCAAAGAAGGCTTGGGCCAACAGCCCAAAACTGATCCTAAGGAGAAGGCTAAATCGGAGACTAGAGATTGGTTGAACAATGTGGTTGGGGAACTGGAATCCCAGATTGATGTCTTTGAAGCTGAGGTTGAAGGGCTTTCTGTCAAGAAACGGAAGAATAGGGCACCCAGATTGACACATCTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTACTTTTGAGGCTACTTGATAATGATGAGTTAAGTGCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGAAGACTATGTAGAGCGTAACCAGGATTCTTTTGATGAATTCAATGATGTTGATGAGCTATACAGTTCATTACCTCTAGATAAGGTGGAGTCTCTTGAAGATCTTGTTACAATTGGTCCCCCTGGTATTGCTAAGGGCACAGCTGCTCCTAGCTTAAAGAATTCAGCGGTAGCATCAGCACCGGCATCAGCATCAGCGTCTCAGACATCTGAGCAAGCTGATGATACAGATTCACAGGACAGCAATTCTGATATTGGTGCTAGAACTCCGCCTTCTAAAACTATCAGCAGTAATTCTGCTAATTCAACCCCAGATGGTAATCATACAACTCCAGTTGCTATGAATATTTTGGCTCATAACTTCTCGGGTGTGCCACCCATCACATCAATACTTGCTGGTTCAAATTCTGTTCAGAGTACCTTGGAGAATCCTACCGCTTCTAATTCTTCATCTTCTGTAAATCAGTCTAGCTCTGTAAAGGAAGAAGAAATTAATAGCTTCCCTGGACGGAGACCATCTCCCCCGCTTTATGATGCTGCGGTTGCAAGGGGCATTGGTAGAAAAAGCCTTGCGAATCAAGCAACCTCTAGTATCCCTCTTGGTTCATGCAACATCATTTCCAACAGTGGGGCCCTTGTTTCAGTCCCTTCTGCATCTGAAATAACAAAGAGAAACATATTGGGTTCTGATGACAGACTTGGAGGTGGTGGGATGGTGCAACCTCTTGTAACCCCCCTTAGTAATAGAACAATCTTGCCTCAGTTTGCAAAGGGTAATGATGGAACTGCCTCGTTTGACTCTGTAAATGTTAATGAAGATGCAGCTGTCTCTGGGAGAGTTTTTTCTTCTTCTGTGGTTCCTGGCGTGCAATTGAGACCTGGAAGCCCCTTCCAGAACCAGAATGAGATGGCATACGTACCTACACTGGTTGGTTATTAA 1566 0.4381 MGASRKLQGEIDRVLKKVQEGIEVFDSIWKKVYDTDNVNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDVFEAEVEGLSVKKRKNRAPRLTHLETSITRHKAHIKKCELLLRLLDNDELSAEQVNDVKDFLEDYVERNQDSFDEFNDVDELYSSLPLDKVESLEDLVTIGPPGIAKGTAAPSLKNSAVASAPASASASQTSEQADDTDSQDSNSDIGARTPPSKTISSNSANSTPDGNHTTPVAMNILAHNFSGVPPITSILAGSNSVQSTLENPTASNSSSSVNQSSSVKEEEINSFPGRRPSPPLYDAAVARGIGRKSLANQATSSIPLGSCNIISNSGALVSVPSASEITKRNILGSDDRLGGGGMVQPLVTPLSNRTILPQFAKGNDGTASFDSVNVNEDAAVSGRVFSSSVVPGVQLRPGSPFQNQNEMAYVPTLVGY 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2025 521 Coils Coil 139 159 - -
Alju03g2025 521 MobiDBLite consensus disorder prediction 111 131 - -
Alju03g2025 521 PANTHER CCR4 NOT-RELATED 24 510 IPR040168 GO:0030015
Alju03g2025 521 MobiDBLite consensus disorder prediction 268 320 - -
Alju03g2025 521 MobiDBLite consensus disorder prediction 348 372 - -
Alju03g2025 521 Coils Coil 41 61 - -
Alju03g2025 521 PIRSF NOT_su_3_5 1 518 IPR012270 GO:0006355|GO:0030015
Alju03g2025 521 MobiDBLite consensus disorder prediction 348 384 - -
Alju03g2025 521 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2025 Alju-ChrAlju03 47774481 47779434 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0855 01 6352341 6361434 Alju03g2025 03 47774481 47779434 CCT