Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0855 ATGGGCGCAAGTCGAAAGCTTCAGGGTGAGATAGATCGCGTTCTCAAGAAGGTCCAAGAAGGTGTTGAGGTCTTCGATAGTATCTGGAACAAGGTTTACGATACAGACAATGCTAACCAGAAGGAGAAATTTGAGGCAGACCTGAAGAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATTAAGACTTGGATACAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTGGTGGATGCTCGCAAGCTCATCGAGCGTGAAATGGAAAGATTTAAGATCTGTGAAAAGGAAACTAAGACCAAAGCCTTCTCCAAAGAAGGCTTGGGCCAACAGCCTAAAACTGATCCAAAGGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAATAACGTGGTTGGAGAGTTAGAATCTCAAATTGATAACTTTGAAGCTGAGCTTGAAGGACTTTCTGTCAAAAAGGGAAAAACCAGACCACCTAGATTGACGCATCTAGAGATGTCAATTGTCCGACACAAGGCTCATATAAAAAAATGTGAGTTGCTCTTGAGGCTGCTAGACAATGATGAATTAAGTCCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGAAGACTATGTGGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGACGTCGATGATTTGTACAGTTCATTACCTTTAGACAAGGTGGAGTCTCTCGAAGATCTTGTCACAATTGGTCCACCTGGTCTTGCTAAGGGTGCACTTGGTCTTGGCTTGAAGACATCTTTAGCTGTATCACCTTCACAAACATCTGAACAAGCAGATGACACTGCCTCCCAGGATAGCAATTCTGATACTGTTGTCAGAACACCACCTTCTAAAAGTAGTGGAATCAGTTCTGCTATGTCGACACCAGCTGGGAACCATGCTACTCCTGTTTCTTTGAATGTTTCGTCTCAGAACTTGCCTGGTGTAACTGCCGCAGCATCTGTCCTCCCTGGTTCAAATTCGGTTCAGACTGCTTTGGAGAATACTGGTGCTGCTAATTCTTCATCTGTAAATCAGTCTACCTCTGTGAAAGAAGATGAGGTTAATGGCTTCCCTGGCCGGAGAGCATCTCCATCACTTTCTGATGCTGCACATGTGAGAGGCATCAGTAGAAACAGCCTGCCAAATCAAGTGACATCTGGAATCCCTCTTGCTTCCAGCAATGGGGCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACAAAGAGAAACTTACTGGGAGCCGATGACAGGCTTGGAAGTAGTGGAATAGGGCAGCCTCTTCTATCACCCTTAAGCAATAGAATGATGTTGCCTCAGGCTGTGAAGGCTAATGATGGAACCAGTCCAGTTGACCCTAATAATGTCAATGAGGGTGCAGCTGTATCTGGGAGAGTTTTTTCCCCTTCTGGTGTTCCTGGCATTCAGTGGAGACCGGGAAGTCCTTTCCAGAACCAAAATGAGACGGGGCAGCTTCGTGGAAGAACTGAAATAGCGCCTGACCAGAGAGAAAAGTTTCTGCAGAAGTTTCAGCAAGTGCAGCAACAAGGGCATAGTACCCTTCTTGGTATGCCTTCTCTTGCTGGTGGAAGTCATAAGCAGTTTTCTGCTCAGCAGCAAAATCCTCTCTTGCAGCAGGCATCAGGTCTCAGTAGCATTTCATCCACTTCGTTACAGCAGCCATCCAATTCTATCTTTTCTCCATCTAGTCAACAGGCAATGATATCAAGTGTTTCTCAAGATTCTGATGGCAATTCTAAAGTTGAAGAACATCAGCAACATAATACTCCTGATGATTCAGTGTCTGAATCTACTGCTAGCAATGGGCTTGGCAAGAATCTTCTAAATGAAGAGGATTTAAAATCCACATATGCTGTAGATTCTCCTGAGGCAGGAGTGTCCGGTTCTCTTACTGAGCCTGCTCAGAGTTCCAGAGATGCTGATTTCTCTCCTGGCCAACCTTTACAATCCAATCAACTTTCTGGTAACCTTGGTGTTATTGGAAGAAGAAGTGTTGCTGATTTTGGAGCCATTGGTGATAATCTTAGTGGAACAAATGTCAATTCTGGTGGAGGGCGTGACCATTTATTTAATATGCAGATGCTTGAGGCTGCATACTACAAACTTCCACAACCTAAAGACTCAGAACGTCCGAGGACTTATACCCCTAAGCACCCAGCAATAACACCTCCAAGTTATCCTCAAGTACAGGCCCCCATTGTCAGTGATCCCTCCTTTTGGGAGAGAGTAGGTGTTGAACCATATGGCACTGACACCCTCTTCTTTGCATTTTATTATCAACAGAACACTTACCAACAATATTTGGCTGCAAAGGAACTAAAGAAGCAGTCTTGGAGATATCACAGAAAATATAACACATGGTTTCAGAGACATGAAGAGCCTAAAGTCGCTACAGATGAATTTGAGCAGGGAACATATGTGTACTTCGATTTTCATATTGCAAATGACGATCTGCAACATGGGTGGTGTCAAAGAATCAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGACGAGCTTAGCGTATAG 2586 0.4412 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKTRPPRLTHLEMSIVRHKAHIKKCELLLRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVDDLYSSLPLDKVESLEDLVTIGPPGLAKGALGLGLKTSLAVSPSQTSEQADDTASQDSNSDTVVRTPPSKSSGISSAMSTPAGNHATPVSLNVSSQNLPGVTAAASVLPGSNSVQTALENTGAANSSSVNQSTSVKEDEVNGFPGRRASPSLSDAAHVRGISRNSLPNQVTSGIPLASSNGALGSVPSASEITKRNLLGADDRLGSSGIGQPLLSPLSNRMMLPQAVKANDGTSPVDPNNVNEGAAVSGRVFSPSGVPGIQWRPGSPFQNQNETGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSLAGGSHKQFSAQQQNPLLQQASGLSSISSTSLQQPSNSIFSPSSQQAMISSVSQDSDGNSKVEEHQQHNTPDDSVSESTASNGLGKNLLNEEDLKSTYAVDSPEAGVSGSLTEPAQSSRDADFSPGQPLQSNQLSGNLGVIGRRSVADFGAIGDNLSGTNVNSGGGRDHLFNMQMLEAAYYKLPQPKDSERPRTYTPKHPAITPPSYPQVQAPIVSDPSFWERVGVEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELSV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0855 861 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Alju01g0855 861 Coils Coil 41 61 - -
Alju01g0855 861 Coils Coil 132 159 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 347 380 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 110 131 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 563 673 - -
Alju01g0855 861 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 701 856 - -
Alju01g0855 861 Pfam NOT2 / NOT3 / NOT5 family 717 855 IPR007282 GO:0006355
Alju01g0855 861 MobiDBLite consensus disorder prediction 563 594 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 268 319 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 481 500 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 347 364 - -
Alju01g0855 861 PANTHER CCR4 NOT-RELATED 24 858 IPR040168 GO:0030015
Alju01g0855 861 Gene3D - 703 856 IPR038635 -
Alju01g0855 861 PIRSF NOT_su_3_5 1 861 IPR012270 GO:0006355|GO:0030015
Alju01g0855 861 MobiDBLite consensus disorder prediction 609 623 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 723 746 - -
Alju01g0855 861 MobiDBLite consensus disorder prediction 646 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0855 Alju-ChrAlju01 6352341 6361434 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0855 01 6352341 6361434 Alju03g2025 03 47774481 47779434 CCT
Alju01g0855 01 6352341 6361434 Alju01g0855 01 6352341 6361434 ECH