Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1982 ATGTGTGAGACTACTAAGATGCCTGAACCTCTCAAATTGGGTGTTGAAAATGAATACTCGGAGGAAGAAAAGAAGAAAAGGGTTGCAGCTATAAAGAAGGCGGCACTCAGTGCATCAAATAAGTTCAAGAGTTCATTTTCAAAGAGGGGTCGCAGGCACAGCAGGGTTATGTCTCTGTCAATTGAGGATGATCTTGATGCTGAAGAGATGCAGGTCGTCGATGCTTTTCGCCAAATGCTTATTTTGGATGAATTATTGCCCGCCAAGCATGACGATCACCATATGATGTTAAGATTCTTGAAAGCAAGGAAATTTGATCTTGAGAAATCAAAGCAAATGTGGGCAGATATGCTTCAATGGAGAAAAGAATTTAGTGCTGACACTGTCATGGAGGATTTTGAGTTTAAAGAACTAGACGAAGTCTTGAAATACTACCCACAAGGGCATCATGGAGTTGATAAGGATGGAAGACCTGTTTACATTGAAAAACTGGGTCAGGTTGATCCTACCAAGCTGTTGCAAGTGACAACATTGGATCGCTATGTGAAGTATCACGTAAGAGAGTTCGAGAGGACCTTTGTTGTGAAGTTCCCAGCCTGTTCAATTGCTGCAAAGAAGCACATTGACCAAAGCACAACTATTTTGGACGTGCAAGGAGTGGGACTGAAAAATTTCACCAAAGCTGCAAGGGATCTCATTCAGAGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGACCTTGAACCGTATGTTCATCATCAATGCTGGCTCTGGATTTAGGCTCTTGTGGAACACTGTGAAGTCATTCCTTGACCCCAAGACATCTGCAAAAATCCATGTCCTAGGCAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGAGGTACTTGTACTTGTGCAGATAAAGGTGGTTGCATGCTTTCAGACAAGGGACCTTGGAATGACCCAGAAATCTTGAAGATGGTTCAAAATGGTGGGGGCAAATGCCAAAGGAGACCCCTGGCTGGTATTGAGGAGAAAACAATAAATGAGGTCGAAGCATCTTACCAAAAGGGAGGCGATTCTTTCAAGAACATAAAATGTTTATCGCCAACGGTGGAGCTTACCAAATCAGGAGTAAGTTTTCAATACTTCACTGATTGTTTCTTCTATAAACCTTTTTCTTGA 1197 0.4227 MCETTKMPEPLKLGVENEYSEEEKKKRVAAIKKAALSASNKFKSSFSKRGRRHSRVMSLSIEDDLDAEEMQVVDAFRQMLILDELLPAKHDDHHMMLRFLKARKFDLEKSKQMWADMLQWRKEFSADTVMEDFEFKELDEVLKYYPQGHHGVDKDGRPVYIEKLGQVDPTKLLQVTTLDRYVKYHVREFERTFVVKFPACSIAAKKHIDQSTTILDVQGVGLKNFTKAARDLIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTSAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGGGKCQRRPLAGIEEKTINEVEASYQKGGDSFKNIKCLSPTVELTKSGVSFQYFTDCFFYKPFS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1982 398 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 137 311 IPR001251 -
Alju02g1982 398 SUPERFAMILY CRAL/TRIO domain 137 333 IPR036865 -
Alju02g1982 398 Pfam CRAL/TRIO domain 143 305 IPR001251 -
Alju02g1982 398 Gene3D - 125 336 IPR036865 -
Alju02g1982 398 SMART CRAL_TRIO_N_2 92 117 IPR011074 -
Alju02g1982 398 CDD SEC14 138 306 IPR001251 -
Alju02g1982 398 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 18 351 - -
Alju02g1982 398 SMART sec14_4 137 308 IPR001251 -
Alju02g1982 398 Pfam CRAL/TRIO, N-terminal domain 84 116 IPR011074 -
Alju02g1982 398 FunFam SEC14 cytosolic factor 125 337 - -
Alju02g1982 398 SUPERFAMILY CRAL/TRIO N-terminal domain 63 132 IPR036273 -
Alju02g1982 398 PRINTS Cellular retinaldehyde-binding protein signature 95 117 - -
Alju02g1982 398 PRINTS Cellular retinaldehyde-binding protein signature 264 283 - -
Alju02g1982 398 PRINTS Cellular retinaldehyde-binding protein signature 297 306 - -
Alju02g1982 398 Gene3D - 37 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1982 Alju-ChrAlju02 19130875 19133878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1982 98 302 Acyl Lipid Metabolism Gene Families AT5G47730 28.774 8.06e-20 88.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1982 02 19130875 19133878 Alju02g1982 02 19130875 19133878 ECH
Alju02g1982 02 19130875 19133878 Alju12g0035 12 570198 575538 ECH