Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1484 ATGGAAGGCAACGTGTCATGCAAGCGGTTCCCACAAGTAAAAGATACGAAATCGTCATGCCTCCTGATCCAACATCTGCTTTCTAGGATAGTTGACACTGACACCACCAGACCTGAGCAGCCTCTATCACATTCTGCATTTTTGCACAGCAGATTCAGTCTGCTTTCTGTTTCCTCTGGAGGCTATTATTTCACCATTTCTTCTATCTTTATGGCTCTCCTTCTCTTCATTATTGTAATCTTTATGATCCCTTCAAGCAATGCCTACGGGCCACCTTCACCTGGCTACTGGCCAAGCTCCAAGTTCCGGACTATGAGCTTTTACAAAGGATTTAGAAACCTCTGGGGTCCTCAGCACCAAACACTACTCAAAAATGAATTAAGAATATGGCTTGATAAAACCTCAGGTAGTGGCTTCAAGTCTGTTCGCCCATTCCGGTCTGGTTACTTCGGTGCTTCCATGAAGCTCCAACCTGGATATACTGCAGGCGTTATATCATCCCTCTATCTTTCAAACAATGAAGCACATCCAGGCTTCCATGATGAGGTGGACATTGAGTTTCTGGGGACAACATTTGGGAAGCCTTACACTTTGCAGACCAATGTGTATATAAGAGGAAGTGGTGATCGGAAAATTATAGGCAGAGAGATGAAATTCCATCTCTGGTTTGATCCTACCCAAGATTTTCATCACTATGCTATACTGTGGAGTCCTAAGGAAATAATATTCTTTGTGGATGATGTGCCCATAAGGAGATACCTGAGGAAGAGTGCGGCAACTTTTCCAGTGAGGCCAATGTGGCTTTATGGCTCAATATGGGACGCTTCATCATGGGCAACAGATGATGGTAAGTACAAAGCTGATTACAGATATCAGCCTTTTGTTGCAAGGTACACCAACTTTAAGGCCAGTGGTTGCTCCGCCTATGCCGCAGCCAGGTGCCACTCTGTTTCCGCCTCGCCGTACCGCTCCGGTGGCCTCACACGACAACAATATGCGGCCATGAGATGGGTACAGAGATACCACATGGTTTACAATTATTGCAGGGATCCTAAAAGAGACCACAGTCTAACCCCAGAATGCTGGCATTCCCACTGA 1098 0.4581 MEGNVSCKRFPQVKDTKSSCLLIQHLLSRIVDTDTTRPEQPLSHSAFLHSRFSLLSVSSGGYYFTISSIFMALLLFIIVIFMIPSSNAYGPPSPGYWPSSKFRTMSFYKGFRNLWGPQHQTLLKNELRIWLDKTSGSGFKSVRPFRSGYFGASMKLQPGYTAGVISSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDRKIIGREMKFHLWFDPTQDFHHYAILWSPKEIIFFVDDVPIRRYLRKSAATFPVRPMWLYGSIWDASSWATDDGKYKADYRYQPFVARYTNFKASGCSAYAAARCHSVSASPYRSGGLTRQQYAAMRWVQRYHMVYNYCRDPKRDHSLTPECWHSH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1484 365 FunFam Xyloglucan endotransglucosylase/hydrolase 94 363 - -
Alju01g1484 365 Gene3D - 87 361 - -
Alju01g1484 365 SUPERFAMILY Concanavalin A-like lectins/glucanases 129 349 IPR013320 -
Alju01g1484 365 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 323 361 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Alju01g1484 365 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 86 298 IPR000757 GO:0004553|GO:0005975
Alju01g1484 365 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 104 361 IPR044791 GO:0004553
Alju01g1484 365 Pfam Glycosyl hydrolases family 16 109 290 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1484 Alju-ChrAlju01 11875181 11877529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1484 71 361 Glycoside Hydrolase AT3G44990 66.553 2.76e-145 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1484 01 11875181 11877529 Alju03g2584 03 52206209 52212274 CCT
Alju01g1484 01 11875181 11877529 Alju01g1484 01 11875181 11877529 ECH