Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1298 ATGTCGGAGAAAGTGTGCGAGCACCACAAGGATAAGCGAAGGAAGATCTTCCGTCGAATATTCGCGGGGATCCTCATCTTCCTGTTCATAGTGCTCGTCGTTATACTCATAATATGGGCAATTCTCCGTCCTTCCAAGCCTGCCTTCGTCCTTCAAGACGTCACCCTTTACGCCTTCAACGCCTCCGTCCCCAACTTCCTCACCTCCAACTTCCAAGTCACGCTCACTTCCCGGAATCGCAACGACAGGATCGGAGTCTACTACGATCGTCTTGACACCTACGTCAGCTACCAGAACCAACAAATCACCTACCGCACATCCATCCCACCGTCGTATCAGGGTCACGACGAAGTCGACGTGTGGTCGCCGTTTGTCTACGGCACTAACGTCCCCGTAGCTCCCTTCAACTTCGTCACCCTCAGTCAGGATCAATCCAACGGCAACGTCCTCGTCATGATCAAAGTTGACGGACGCGTGAGATTCAAAGTCGGGGCCTTCATTTCCGGCCGATACCATCTCTATGTACGGTGCCCGGCGTTTATTACATTCGGGCCCCGGAGCAACGGAATCGCCGTGGGTGAGCACGCCATGAAGTATCAGTTGGTCCAGCGATGCTCCGTCAGTGTGTGA 630 0.5397 MSEKVCEHHKDKRRKIFRRIFAGILIFLFIVLVVILIIWAILRPSKPAFVLQDVTLYAFNASVPNFLTSNFQVTLTSRNRNDRIGVYYDRLDTYVSYQNQQITYRTSIPPSYQGHDEVDVWSPFVYGTNVPVAPFNFVTLSQDQSNGNVLVMIKVDGRVRFKVGAFISGRYHLYVRCPAFITFGPRSNGIAVGEHAMKYQLVQRCSVSV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1298 209 PANTHER OS05G0367900 PROTEIN 17 206 IPR044839 GO:0098542
Alju01g1298 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1298 Alju-ChrAlju01 10196404 10197033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1298 13 177 EF-hand Containing Proteins AT5G21130 20.809 9.78e-07 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1298 01 10196404 10197033 Alju03g2420 03 50824505 50825134 CCT
Alju01g1298 01 10196404 10197033 Alju01g1298 01 10196404 10197033 ECH