Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03109 ATGAACACTCCAATAGTGCTAGCTTTACCATACCCAGCTCAAGGACACGTCACTCCCTTTATGAGCTTCTCACAAAAGCTGGTCGAGAATGGATGCAAAGTCATCTTTGTTAACACGGAGATCAACCATAACCGTTTTGTGAGTTCCATGATGGTTAGGGAAAAAGACAATAATACCCTTGATGATGAAACAATAAAACTGGTTTCCGTCCCGGATGGTTTAAGCCCTGAGGACGAAAGAACCAATTTCGCCAAACAATGTGTTGGTTTGAAAAGCAGCTTGCCTTCAATTCTTGAGAAATTGATAGAAGATTATGGAGTTAGTTGCATCGTTGTTGATTTTGCAATGGGATGGGCATTGGAAGTTGCGAATAAGATGGGAATCAAAGGCGCTTTTTTCTTTCCAGCGTCAGCAGCTATGTTTGCTTTGTTGAACAATATTCCTATGCTCATTCATCGTGGCATCATAGATTCTTCTGGACTCCCAGTCACTAAAAGGACATTTCGGTTATCAGAAAGTATGGCTCTTATGAGCACAGAAACCCTGTATTGGTCAAACACTGCTAATGACCCAATAAATGCAAAGACGCTATTCGATTATGTAATGCATTGCGGACAAGCTCTAACCATGTCACACTGGTGGTTGTGCAACACTGCATATGATCTTGAACCTGCAGTTTTCTCCTTTCTCCCAAAGATCTTACCAATTGGCCCATTGTTAAGAACCTACAACACAAATTATATCACAACATCTTTCTGGGAAGAAGATTCCTCTTGCATGAGTTGGCTTGATCAACAGCCTCACGCTTCTGTCGTGTATGTCGCCTTTGGTAGTTTCGCTCTTTTCGAGGAAACACAGTTTCGCGAGCTAGCTTTTGGACTTGAGTTAACAAAAAGACCGTTTCTTTGGGTGGTGCGTCAAGATTCCGTTAACAACAAAAATGTTTCTTACAAGCATGAATTTGAAGGGAGTAAGGGTAAGATTGTGGAATGGGGTCCTCAACAGAAGATCCTAAGTCACCCTTCTATAGCTTGCTTTATAAGTCACTGTGGTTGGAATTCCACCATTGAAGGTTTGTCTAATGGACTTCCCTTCTTGTGTTGGCCGTACTTTTCGGATCAAGTTTATGACAAAATGTATATTTGTGATGAGTTGAAAGTTGGTTTGGGATTTGATTCGGATGAAAATGGATTGATCTCGCGTGAGGAAATAAAAGCCAAAGTGGACAAACTACTTGCTGATGAGAACATTAGATTAAGGTCACGTGTGCTAAAGAAGAAGATAGAAAACAACATTCAACAAGGAGGTAGTTCTTCCGAGAACTTAAACAAGTTCATTAAGTGGTTGAAGGAatag 1356 0.4071 MNTPIVLALPYPAQGHVTPFMSFSQKLVENGCKVIFVNTEINHNRFVSSMMVREKDNNTLDDETIKLVSVPDGLSPEDERTNFAKQCVGLKSSLPSILEKLIEDYGVSCIVVDFAMGWALEVANKMGIKGAFFFPASAAMFALLNNIPMLIHRGIIDSSGLPVTKRTFRLSESMALMSTETLYWSNTANDPINAKTLFDYVMHCGQALTMSHWWLCNTAYDLEPAVFSFLPKILPIGPLLRTYNTNYITTSFWEEDSSCMSWLDQQPHASVVYVAFGSFALFEETQFRELAFGLELTKRPFLWVVRQDSVNNKNVSYKHEFEGSKGKIVEWGPQQKILSHPSIACFISHCGWNSTIEGLSNGLPFLCWPYFSDQVYDKMYICDELKVGLGFDSDENGLISREEIKAKVDKLLADENIRLRSRVLKKKIENNIQQGGSSSENLNKFIKWLKE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03109 451 Gene3D Glycogen Phosphorylase B; 247 430 - -
Aip10g03109 451 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 447 - -
Aip10g03109 451 Gene3D Glycogen Phosphorylase B; 9 442 - -
Aip10g03109 451 CDD GT1_Gtf-like 6 449 IPR002213 GO:0008194
Aip10g03109 451 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Aip10g03109 451 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 255 379 IPR002213 GO:0008194
Aip10g03109 451 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 447 - -
Aip10g03109 451 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03109 Aip-Chr10 128457596 128461354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03109 1 450 Glycosyltransferase AT3G02100 41.164 3.69e-120 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03109 - - gmx:100816666 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03109 10 128457596 128461354 Aip10g03109 10 128457596 128461354 ECH
Aip04g03378 04 128202526 128204213 Aip10g03109 10 128457596 128461354 PCT