Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03378 ATGATCCTCAAGCATGTTCTAGTTCTTCCATTTCCAGCACAAGGGCATGTGAACCCTCTAATGCACTTGTCTCACAAACTAGCACAACATGGCTGCAAAGTTACTTTTGTCAACACTGAGTTCAACCATAAGAGAGTGGTGAGTGCAATGAATGGGAAGGTTAGTCTTGAAGGGTCAAAAGTGGAACTAATCTCAATCCCTGATGGGTTAGGACCTGAAGAAGATAGAAATGACTTGGTTGGTTTAGCTTTGTCAATGATGAGAACCATGCCTTTTGCTCTTGAGAAGGTTATAAGGGACATTAATTCTCTTGATGGTGGAAGGAAAAGACTCACTTGCATAATTGTTGATACTAGTATGGCATGGGCCTTGGAAGTTGTACAGAAGCTAGGAATCAAGGGGGCTCTCTTCATCCCTTTGTCAGCAGCTATTATTGCCATGGAAGATAACTTGCAAAAGCTCATTGAGGATGGAATTATTGATAGTGATGGATTCCCTATCAGGAAAGGGAAATTTCAAGTATCTCCAGAAATGCATACTATGGACACAGCTTATTTGCCCTGGTGCTGCATAGGTGACCCAATCACACAAAAGAATTTGTATCATTACATTGTAAAGTTGGCACAATGTTCACATTTAACAAATTGGTGGCTCTCTAACACAACTTATGAACTTGAACATGGAGCCTTATCAGTTTGCCCAAAAATCCTACCAATAGGGCCATTGATTGAGAGTGCTAAGTACAGATCAATGGGTCAATTCTGGGAGGAAGACCTCTCTTGTTTGAATTGGCTCAACCAACAACCACCTTGTTCTGTTATTTATGTCGCCTTCGGTAGCATCGCGATTTTCGACCCTTGGCAACTCAAGGAACTGGCCCTTGGACTAGAACTTGCCAATAAGCCTTTTCTTTGGGTTGTACGTGAAGATTCCAACAGCATTAACAAACTTGCATGCATTGAAGAATTTCAAGGTACAAGAGCTAAGATTATTAAATGGGCACCCCAAAACTCGGTGTTAAGCCACCCTGCCGTAGCTTGTTTCATTAGCCACTGTGGTTGGAACTCTGTTATGGAAGGCGTGTCTAATGGAGTACCCTTCTTGTGCTGGCCGTATTTTGCTGACCAGCTTCATAACAAGGCATACATATGTGATGTTTGGAAGCTGGGGTTGGGTTTTGAATTTGGTGAAAAAGGGATCATATCACGTTGGGAAATAAAGAAGAAAGTGGATCAACTCCTTGGAGATCAAAACATAAGGGTAAGATCTAAGAAAATGAAGGAGAAGGTAATGAATAGCATTGTAGAAGGAGGGAAGTCCTCTGAGAACTTCAACAAGTTTATGGACTGGCTCAAAGAATAG 1362 0.417 MILKHVLVLPFPAQGHVNPLMHLSHKLAQHGCKVTFVNTEFNHKRVVSAMNGKVSLEGSKVELISIPDGLGPEEDRNDLVGLALSMMRTMPFALEKVIRDINSLDGGRKRLTCIIVDTSMAWALEVVQKLGIKGALFIPLSAAIIAMEDNLQKLIEDGIIDSDGFPIRKGKFQVSPEMHTMDTAYLPWCCIGDPITQKNLYHYIVKLAQCSHLTNWWLSNTTYELEHGALSVCPKILPIGPLIESAKYRSMGQFWEEDLSCLNWLNQQPPCSVIYVAFGSIAIFDPWQLKELALGLELANKPFLWVVREDSNSINKLACIEEFQGTRAKIIKWAPQNSVLSHPAVACFISHCGWNSVMEGVSNGVPFLCWPYFADQLHNKAYICDVWKLGLGFEFGEKGIISRWEIKKKVDQLLGDQNIRVRSKKMKEKVMNSIVEGGKSSENFNKFMDWLKE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03378 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 387 IPR002213 GO:0008194
Aip04g03378 453 Gene3D Glycogen Phosphorylase B; 250 432 - -
Aip04g03378 453 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 449 - -
Aip04g03378 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 451 - -
Aip04g03378 453 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 449 - -
Aip04g03378 453 Gene3D Glycogen Phosphorylase B; 8 444 - -
Aip04g03378 453 CDD GT1_Gtf-like 5 431 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03378 Aip-Chr4 128202526 128204213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03378 5 452 Glycosyltransferase AT3G02100 44.323 1.98e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03378 - - gmx:100816177 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03378 04 128202526 128204213 Aip04g03378 04 128202526 128204213 ECH
Aip04g03378 04 128202526 128204213 Aip10g03109 10 128457596 128461354 PCT