Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03080 ATGATTAGCACTCCAACAGTGCTAGTCGTGCCATATCCAGCTCAAGGGCATGTAAACCCCATGATGAGCCTTTCACATAAGCTGGTTGAGCATGGATGCAATATCATCTTTGTCAACTCAGACTTCAACCATAAGAGAGTAGTCAGATCCATGGAGAACAACAATGGATCACCTTCACCAATCAAATTGGTGTCAATCCCAGATGGGTTGGGACCTGACCATGACAGAGTCCATCTAGGAGAGTTATGTGATTCCGTATTGAGGACCATGCCTTCAGAGCTTGAGAAGCTCATAGAAGATCTTCAATTGAATGAGGGCATTAAAGTAACTTGCATTGTTGCAGATGTGATTATGGGTTGGGCATTGGAAGTTGCACGCAAAGTGGGAATCAAAGGTGCATTATTTTGGCCTGCGGCAGCATCTATGTTTGTGTTGCAGTATAACGCTCCCAAACTTATTGCTGATGGCATCTTAGACTCTGATGGATTTGAGATCTCAAAAAAACCATTATGGTTATCCTCTTACATTCCTGGTATGGACATCGGATCTAGTTGGTGGCGAAATCTCTTTGATCCGTCAGTTGAAAAGAGAATGTTTAAATATGTGGTGCACTGCATGCGTCATTCAAATTTGACAGAGTGGTATCTCTGTAACAGCATTCAAGAACTTGAACCTGAAGCATTTTCCTTAGTACCAAAGCTATTATCGCCAATAGGCCCATTATTGACAAGGGCAACTACAAAATCATCTGGACAATTCTGGAAAGAAGATATATCTTGCATGAGTTGGCTAGATCAACAACCTCATTGTTCTGTAGTTTATGTTGCCTTTGGTAGTCACACACTACTTGACCAAAGACAATTCACAGAACTTGCACTTGGACTTGAACTCACCAATAGACCTTTTCTTTGGGTTGTGCGTCAAGATCCTAATTGCACCAATAAAATGTGTCTCCCTCTTGAATTCAAGGGTTATAGAGGTAAAATAACTGGATGGGCTCCTCAAAAGAAGGTGCTAAGTCACCCTGCTATAGCTTGTTTTGTAAGTCATTGCGGTTGGAATTCGACCATAGAGGCTTTGTCTAATGGAGTGCCTCTCCTGTGTTGGCCGTATTTCGCAGACCAACTTTTCAACAAGAATTATGTTTGTGATACATTGAAGGTTGGGATGGCATTTGATTCGGATGAAAAGGGATTAGTGTCACGTAAAGAGATAAAGGCAAAAGTGGATCAGTTGCTTAGTAATGAGAATACGAGATCAAGGTCTCATAAGCTGATGGAGAAGCTAAAGCAGAATATGGAAGAAGGAAGTACTTCTTCAAAGAACTTAAGCAGGTTTCTGACTTGGTTGAAAGGATAA 1359 0.4135 MISTPTVLVVPYPAQGHVNPMMSLSHKLVEHGCNIIFVNSDFNHKRVVRSMENNNGSPSPIKLVSIPDGLGPDHDRVHLGELCDSVLRTMPSELEKLIEDLQLNEGIKVTCIVADVIMGWALEVARKVGIKGALFWPAAASMFVLQYNAPKLIADGILDSDGFEISKKPLWLSSYIPGMDIGSSWWRNLFDPSVEKRMFKYVVHCMRHSNLTEWYLCNSIQELEPEAFSLVPKLLSPIGPLLTRATTKSSGQFWKEDISCMSWLDQQPHCSVVYVAFGSHTLLDQRQFTELALGLELTNRPFLWVVRQDPNCTNKMCLPLEFKGYRGKITGWAPQKKVLSHPAIACFVSHCGWNSTIEALSNGVPLLCWPYFADQLFNKNYVCDTLKVGMAFDSDEKGLVSRKEIKAKVDQLLSNENTRSRSHKLMEKLKQNMEEGSTSSKNLSRFLTWLKG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03080 452 CDD GT1_Gtf-like 7 442 IPR002213 GO:0008194
Aip10g03080 452 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Aip10g03080 452 Gene3D Glycogen Phosphorylase B; 9 443 - -
Aip10g03080 452 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 416 IPR002213 GO:0008194
Aip10g03080 452 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 451 - -
Aip10g03080 452 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 4 451 - -
Aip10g03080 452 Gene3D Glycogen Phosphorylase B; 248 431 - -
Aip10g03080 452 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03080 Aip-Chr10 127932779 127935130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03080 2 451 Glycosyltransferase AT3G02100 41.991 6.27e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03080 - - ahf:114927331 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03080 10 127932779 127935130 Aip04g03376 04 128177144 128179223 PCT
Aip04g03372 04 128101659 128104078 Aip10g03080 10 127932779 127935130 PCT