Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03376 ATGGGAATTATCCCTCACTTTCTTGTTATACCATTTCCAGTGTTAGGACACATTAATCCCCTAACACAATTCTCTAATGTTCTAACCAAACATGGTTGCAAGGTCACTTTCTTACACACTGAATTCAGCCACAAGAGAGCTAAAATCTCTGAGGATGATGATGGTGGTTCCCAAGATCACATTAAATATGTGACACTCCCAGATGGTTTGGACCATGAAGATGATAGAAGTGACCATGTTAAGGTTCTTTTTTCTATGAAAAAAACAATGCCTTCTTTGCTTCCAAAGCTCATAGAAGATATCAATTCTTTGGATGCTAACAACAAGATCAGTTGTATTGTTGCCACAATTAATATGGGTTGGGCCTTGGAAGTTGGTCGCAAATTGGGAATCAAATGTGCTCTTCTATTTCCAGGTTCAGCAACTACAATGGCTTCAGTTCATTGTCTCCCAAAGCTCATGGAGGAAGGAATTGTTGATTCTGATGGAAACATCACCAAAACACAGGAAATTCAATTTTCTCCACTGATGCCTATGATGGACGCAAAAAACTTTGCATGGGGTACCATTGGAAAGGCCTTCTTCGATCATCTTTATCAGGAAGAGATACAACTTCTCAACTTAGCAGAGTGGTGGCTTTGCAATAGTGCCTATGATCTTGAACCAGGAGCATTCTCCATGTCTCCAAAGTTCCTATCAATTGGACCATTGATTGAAAGTGACAACAATAACAAAAACAAAAGTTCTTCATTTTGGCAAGAAGACACAACATGCTTAGAATGGTTGGATCAACAACAACCTCAATCTGTTGTATATGTTTCATTTGGTAGCTTGGCAGTTATGGAATCCAACCAACTCAAAGAACTAGCACTTGCACTTGATCTCATTGACAAGCCTTTTCTTTGGGTTGTACGACCAGATAATATGAATAGCGAAAGAAACAACAAATACCCAGATGAATTTCATGGAAGAAAAGGCAAAATTGTTGATTGGGCTCCCCAGAAAAAAGTATTAAACCACCCTGCTATTGCTTGCTTCATAAGTCATTGTGGTTGGAATTCTACTATTGAAGGTGTGTATAGTGGTGTTCCCTTCTTGTGCTGGCCATTTTTCAGTGATCAATTTTGGGATGAATCATATATTTGTAATGTTTGGAAAGTTGGGTTGGGATTGAACAAGGATGACAATGGATTCATATCAAAGGAAGAGATAAAGAAGAAGGTGTTGCAATTGCTTGGTGATAAAGCCATAAGGGAAAGGTCTTTGAAATTGAAACAAGTGACTAGGAATAACCTAACTGAAGGTGGCCAATCTACAAAGAATCTTCAAAATTTTGTCAATTGGGCAAAGTAA 1353 0.3836 MGIIPHFLVIPFPVLGHINPLTQFSNVLTKHGCKVTFLHTEFSHKRAKISEDDDGGSQDHIKYVTLPDGLDHEDDRSDHVKVLFSMKKTMPSLLPKLIEDINSLDANNKISCIVATINMGWALEVGRKLGIKCALLFPGSATTMASVHCLPKLMEEGIVDSDGNITKTQEIQFSPLMPMMDAKNFAWGTIGKAFFDHLYQEEIQLLNLAEWWLCNSAYDLEPGAFSMSPKFLSIGPLIESDNNNKNKSSSFWQEDTTCLEWLDQQQPQSVVYVSFGSLAVMESNQLKELALALDLIDKPFLWVVRPDNMNSERNNKYPDEFHGRKGKIVDWAPQKKVLNHPAIACFISHCGWNSTIEGVYSGVPFLCWPFFSDQFWDESYICNVWKVGLGLNKDDNGFISKEEIKKKVLQLLGDKAIRERSLKLKQVTRNNLTEGGQSTKNLQNFVNWAK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03376 450 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 4 450 - -
Aip04g03376 450 Gene3D Glycogen Phosphorylase B; 9 442 - -
Aip04g03376 450 Gene3D Glycogen Phosphorylase B; 246 430 - -
Aip04g03376 450 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 450 - -
Aip04g03376 450 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 205 429 IPR002213 GO:0008194
Aip04g03376 450 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 448 - -
Aip04g03376 450 CDD GT1_Gtf-like 5 431 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03376 Aip-Chr4 128177144 128179223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03376 5 450 Glycosyltransferase AT3G02100 40.347 3.78e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03376 - - gmx:100800937 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g03376 04 128177144 128179223 Aip04g03376 04 128177144 128179223 ECH
Aip10g03080 10 127932779 127935130 Aip04g03376 04 128177144 128179223 PCT
Aip04g03376 04 128177144 128179223 Aip10g03107 10 128416242 128418772 PCT