Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02983 ATGGCCAAGTCTAAGTTCCTTCCTGTTTTCATCTTGGCCCTCATTGTCATTTCCATGCTTCAAACTGTGGTCATGGCATCTCATGGGCATGGAGGACACCATTACAATGACCAGAGGAAATATGGACCTGGCAGTCTCAAGAGCTACCAATGCCCATCAAAATGTTCAACAAGGTGCAGTAGGACCCAATACCACAAGCCGTGCATGTTTTTCTGTCAGAAGTGCTGTAACAAGTGCCTCTGTGTTCCCCCGGGGTATTATGGGAACAAAGCTGTCTGCCCCTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCAAAATGCCCTTAA 330 0.4788 MAKSKFLPVFILALIVISMLQTVVMASHGHGGHHYNDQRKYGPGSLKSYQCPSKCSTRCSRTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02983 109 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 109 - -
Aip10g02983 109 Pfam Gibberellin regulated protein 50 109 IPR003854 -
Aip10g02983 109 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02983 Aip-Chr10 126083210 126086117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02983 - - gmx:100305480 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02983 10 126083210 126086117 Aip10g02983 10 126083210 126086117 ECH
Aip10g02983 10 126083210 126086117 Aip04g03280 04 127178352 127180107 PCT