Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03280 ATGGCTAAGTTCTTTGCTGCTTTCATCTTGGCTCTCATTGCCATTTCAATGCTCCAAACTATGGTCATGGCTGCTAATGGGCAAGGAGGCCATCTCTATGACAACAAGAGCCAATATGGACCTGGGAGTGTCAAGAGTTATCAATGCCCATCACAATGCTCAAGGAGGTGTGGCAAGACCCAATACCACAAGCCCTGCATGTTCTTTTGTCAGAAGTGTTGTAGGAAGTGCCTTTGTGTTCCTCCGGGGTATTATGGTAACAAAGCTGTTTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCAAAATGCCCTTAA 324 0.466 MAKFFAAFILALIAISMLQTMVMAANGQGGHLYDNKSQYGPGSVKSYQCPSQCSRRCGKTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03280 107 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 107 - -
Aip04g03280 107 Pfam Gibberellin regulated protein 48 107 IPR003854 -
Aip04g03280 107 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03280 Aip-Chr4 127178352 127180107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03280 - - gmx:100787539 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02983 10 126083210 126086117 Aip04g03280 04 127178352 127180107 PCT