Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02946 ATGGTTAAGGGTCCAGGTCTCTACTCTGACATTGGAAAGAAAGCCAGAGATCTGCTGTTCAAGGATTACCACACTGATCAGAAGTTCACCGTCACCACCTACTCACCCACTGGAGTTGCTATAACATCAACAGGGATCAAGAGAGATGAACTATTTATGGCTGAAGTTAACACTCAGTTGAAGAACAAGAATGTCACCACTGACATCAAAGTTGACACCGATTCTAATCTCTTCACAACCATCACTGTTAATGAGCCTGCTCCTGGTCTCAAAACCATCTTTAACTTCAGAATTCCTGATCAAAGGTCTGGAAAGGTGGAAGTTCAGTATGTGCATGGCTATTCTGGAATAAGCACCAGTGTTGGGCTCACTGCAAATCCAATTGTTAACTTCTCTGGTGTTTTAGGGACTGACGTACTTGCAATTGGTTCTGAGCTCTCTTACGACACCAAAATTGGGGAGTTCACAAAATACAATGCTGGAGTGAACTTCACCAAAGCTGACTTGGTTGCCTCTTTGACTGTGACTGACAAAGGCGATACCCTGAATGCGTCATACTACCATTTAGTCAACCCCTTGAACAACACTGCGTTTGGTGCCGAGGTGACTCACAGTTTCTCAACCAATAAGAACACCCTCACACTTGGCAGCCAGCATGCACTAGACCCCTTGACCACAGTGAAGGCTCGGATCAACCACTCCGGCAAGGCACATGCCCTTATCCAGCATGAGTGGCGTCCCAAATCATTCTTCACCATTTCCGGGGAGGTCGACACCAAGTCTTTCGAGCAGAGTGCCAAGATTGGATTGGGTTTGGCTCTCAAACCCTAA 831 0.4633 MVKGPGLYSDIGKKARDLLFKDYHTDQKFTVTTYSPTGVAITSTGIKRDELFMAEVNTQLKNKNVTTDIKVDTDSNLFTTITVNEPAPGLKTIFNFRIPDQRSGKVEVQYVHGYSGISTSVGLTANPIVNFSGVLGTDVLAIGSELSYDTKIGEFTKYNAGVNFTKADLVASLTVTDKGDTLNASYYHLVNPLNNTAFGAEVTHSFSTNKNTLTLGSQHALDPLTTVKARINHSGKAHALIQHEWRPKSFFTISGEVDTKSFEQSAKIGLGLALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02946 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip10g02946 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Aip10g02946 276 Gene3D Porin 1 275 IPR023614 -
Aip10g02946 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip10g02946 276 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02946 Aip-Chr10 125007213 125011476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02946 K15040 - gmx:100170756 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02056 01 110722500 110724113 Aip10g02946 10 125007213 125011476 ECH
Aip03g04225 03 126468517 126471103 Aip10g02946 10 125007213 125011476 ECH
Aip10g02946 10 125007213 125011476 Aip10g02946 10 125007213 125011476 ECH