Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02056 ATGAGCAAGTGTCCGGGGATATATTTTGATATTGGGAAGAAGGCCAGAGGTGTTCTTCAAAAGGACTATGCTCATCAATCACCAATTCACTTTCACTACCAGTTTATGGACTGGAATGTAGACCTCTCTTGTCAAGTAGAAGAAATTGTACCTGGATTCAGGAGCCTTTTCAACTGTACCATACCTGATTCTGGAAAGGTGGAACTACAATACTTGAACAACTTCAGTGGAGTTACTGGATGTATTGGATTAGTAGGAAACTCAAATGGAGGATATGACCCTGCTGTAAACATCTCAGGCCTTGTAGGAACAAGCACTGTCTCCCTTGGAGCCAATGTCGCTTTCGACATAGCATCAAGAACAATCAACAAATTTAATGCAGGCTTAAACTTCAACACTGCCTTCCTTATTGCTTCCCTAACCTTAAATGACAAATTTGACAAGGTGAAAGCCTCATGTTATCATGAAGTGAATCCTCTGACCAAGACAGCTATTGCAGCAGAGCTGAGGCATAGCTTTTCGGAAAGCGAGACTGGTGTTACCATTGGTGCTCAACATGCTTTCTTACCGGACACATTGGTGAAAGCTCGGCTGGATAGTACTGGCAAGGTTGGCGCGCTCATTCAACAAGGTTTCTTGCAGAGATTTTTTGTAACTATGGCTGGGGAAATGGATTTTACATCCATAAATGATAAGGCTCCTAAAATTGGAGTCTCTCTGGCTCTAACACCTTAA 735 0.4245 MSKCPGIYFDIGKKARGVLQKDYAHQSPIHFHYQFMDWNVDLSCQVEEIVPGFRSLFNCTIPDSGKVELQYLNNFSGVTGCIGLVGNSNGGYDPAVNISGLVGTSTVSLGANVAFDIASRTINKFNAGLNFNTAFLIASLTLNDKFDKVKASCYHEVNPLTKTAIAAELRHSFSESETGVTIGAQHAFLPDTLVKARLDSTGKVGALIQQGFLQRFFVTMAGEMDFTSINDKAPKIGVSLALTP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02056 244 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 243 - -
Aip01g02056 244 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip01g02056 244 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 243 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip01g02056 244 Pfam Eukaryotic porin 37 233 IPR027246 GO:0005741|GO:0055085
Aip01g02056 244 Gene3D Porin 3 243 IPR023614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02056 Aip-Chr1 110722500 110724113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02056 K15040 - gmx:100787061 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02056 01 110722500 110724113 Aip10g02946 10 125007213 125011476 ECH
Aip03g04225 03 126468517 126471103 Aip01g02056 01 110722500 110724113 ECH
Aip01g02056 01 110722500 110724113 Aip01g02056 01 110722500 110724113 ECH