Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02460 ATGGCGTTTTTGAGATCTCAATCGCTCTCTGCGGTTGCTGTTCTTCTGCTACTCCTCATCCATGGAGCTCACTCCTTCTACCTCCCCGGCGTCGCCCCGCAGGATTTCCAGAAGGGAGATCAATTACAAGTGAAAGTAAACAAATTAACATCAACAAAGACCCAGCTTCCATACACATATTATTCACTTCCTTATTGTCGTCCAGAAAAAATACAGGATAGTGCTGAAAATCTCGGGGAAGTACTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTCAAAATGCGTGAACCACAAATGTGCAATGTTGTGTGTAATCTTAAACTCGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAACGATGAGTATCGGGTGAACATGATCCTAGATAACCTTCCTCTAGTTGTTCCCATAAAAAGGACCGATCAGGAGGATTCTTATTTTTATCAGCTCGGTTACCATGTCGGACTCAAAGGGCTGTACAGCGGGGTTAAGGAGGAGAAATTTTTTATTCACAATCATTTGGCATTTACTGTTAAGTATCATAAAGATGCAGTGACGGAATCTGCTAGGATCGTGGGCTTTGAGGTTAAGCCATTCAGTATCAAACATGAATATGATGGTAAGTGGGATGAAAAGACTCGTCTAACAACCTGTGACCCCCATGCTAAACACACAGTTGTCAACTCCAACACTCCTCAAGAGGTTGAAGAAAACAAGGAGATTATCTTCACATATGACGTTGACTTCCAGGAAAGTGAGGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGTTGATGAATGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTCCTCTCGGGAATGGTAGCAATGATAATGCTGCGGACACTGTACCGTGACATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACTGGTTGGAAACTTGTCCATGGTGATGTGTTTAGGCCTCCTAACAACTCAGATTTGCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGAATGATATTGGTAACCATGATATTTGCTGTGCTTGGGTTCCTTTCTCCTTCAAACCGAGGTGGCCTAATGACAGCCATGCTCTTGCTATGGGTTTTCATGGGAATTTTCGCTGGTTATGCTTCAACTCGCTTATACAAAATGTTCAAGGGAACGGAGTGGAAGAAAATGGCCCTCAGAACTGCAGTAGTGTTCCCTGGAATTGTATCTGCCGTTTTCTCTGTGTTAAATACTCTCATATGGGGCGAAAAATCATCTGGAGCTGTGCCATTTGGAACTATGTTTGCTCTGATCTTCTTATGGTTTGGGATTTCAGTTCCACTTGTTTTCGTTGGTAGTTATGTTGGGTTCAAGAAGCCAGCAATTGAAAATCCTGTGAAGACAAATAAAATCCCAAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTCTTCTCGGTTTTGATTGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAACTTTTCTTCATCCTCACTTCAATCTGGTTGAATCAGTTTTACTACATCTTTGGATTCCTCTTTTTGGTCTTCATCATCCTGATCATCACTTGTGCCGAAATAACCATTGTTCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACCTCGGGTTCTTCCGCACTTTATCTCTTCCTCTATGCCACATTCTACTTCTTCACCAAGCTTGAGATCACAAAGTTGGTATCTGCAATATTATACTTTGGGTACATGCTCATAGCTTCTTATGCGTTCTTTGTGGTAACCGGTACTATAGGATTTTATGCTTGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1920 0.4219 MAFLRSQSLSAVAVLLLLLIHGAHSFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYTYYSLPYCRPEKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNVVCNLKLDAKTAKEFKEKINDEYRVNMILDNLPLVVPIKRTDQEDSYFYQLGYHVGLKGLYSGVKEEKFFIHNHLAFTVKYHKDAVTESARIVGFEVKPFSIKHEYDGKWDEKTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVDFQESEVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGTEWKKMALRTAVVFPGIVSAVFSVLNTLIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02460 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 9 639 IPR004240 GO:0016021
Aip10g02460 639 Pfam Endomembrane protein 70 57 595 IPR004240 GO:0016021
Aip10g02460 639 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 9 639 - -
Aip10g02460 639 SUPERFAMILY MFS general substrate transporter 277 462 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02460 Aip-Chr10 110504437 110508416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02460 1 639 Miscellaneous Gene Families AT5G10840 84.056 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02460 K17086 - gmx:100780976 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02460 10 110504437 110508416 Aip10g02460 10 110504437 110508416 ECH
Aip06g03458 06 131714294 131717673 Aip10g02460 10 110504437 110508416 PCT