Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03458 ATGTCGTTTCGGAGATCCCTTGTGTTCTCCGCATCCTTCTTCTTCCTCCTCTTCCATGGCGCCTTCTCATTCTACCTTCCCGGCGTCGCACCTCAGGATTTCCAAAAGGTAACCACAAACCAAATCTCTCTTTGTTTACATTTTCTTCATTCGAGCTTTTCCCCGATCTGCCTTTTCAGATCTTGGATCTGCCATAAGCTTCATATATTCTATTTAGTTTTAGGTAGTTGCTTGCATTTTTTTGTGACATTTTCTGCTGAAAATCTTGGGGAAGTGCTTCGAGGTGATCGCATTGAAAATTCTCAGTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTGAAACTTGATGCCCAGAGTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTACCGGGTGAACATGATCCTAGATAACCTTCCCTTGGTGGTTCCGATAAAACGTCCAGATCAGGACTCTACTGTTTATCAGCTCGGTTTCCATGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAGGAAGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGATTTGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTGAAGCCATTCAGTGTTAAACATGAGTATGATGGGAATTGGGGTGAAAATACACGTTTGACAACTTGTGATCCTCATGCTAAGCACACAGTTGTCAACTCCAACACTCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACATTTGATGTTGAATTTGAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAGATTCACTGGTTCTCAATTGTGAATTCATTGATGATTGTTCTCTTTCTCTCTGGAATGGTGGCAATGATAATGTTGCGTACACTCTATCGTGATATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCGCAAGAAGAGACAGGCTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAACAACTCAGATTTGCTGTGTGTTTACGTTGGAACAGGGGTTCAATTTTTCTTTATGATACTAGTAACCATGATCTTTGCCGTCCTTGGATTCCTTTCTCCTTCTAACCGTGGTGGGCTTATGACAGCCATGCTGTTGCTTTGGGTATTCATGGGAATTTTTGCTGGTTATGCTTCTTCTCGCTTGTACAAAATGTTCAAAGGATCAGAGTGGAAGAGTATTTCCCTCAGGACTGCAACCTTGTTCCCTGCAACTGTCTGTGCTGTTTTCTTTGTGTTAAATGCTCTCATTTGGGGAGAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCTTTGATCTTTCTATGGTTCGGAATCTCTGTTCCACTTGTTTTTGTGGGTGGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAACCCGGTAAAGACCAACAAAATCCCAAGGCAGATCCCGGAGCAAGCATGGTACATGAACCCGGTCTTCTCAGTTCTGATTGGAGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATTTGGCTGAACCAATTTTACTACATCTTTGGTTTCCTCTTCTTGGTCTTCGCCATCCTCATCGTCACTTGTGCCGAAATAACAATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGTTCATACCTCACCTCTGGCTCATCTGCACTCTACCTCTTCCTTTATGCAACGTTCTACTTCTTCACCAAGCTTGAAATCACCAAGTTCGTATCTGCTGTACTATACTTTGGCTACATGCTTATAGTATCTTATGCCTTTTTCGTGGTAACTGGTACCATCGGATTTTACGCATGCTTCTGGTTCACAAGGCTCATCTACTCTTCAGTCAAAATTGATTAG 1950 0.4231 MSFRRSLVFSASFFFLLFHGAFSFYLPGVAPQDFQKVTTNQISLCLHFLHSSFSPICLFRSWICHKLHIFYLVLGSCLHFFVTFSAENLGEVLRGDRIENSQYVFKMREPQMCNIVCKLKLDAQSAKEFKEKIDDEYRVNMILDNLPLVVPIKRPDQDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDLLTESARIVGFEVKPFSVKHEYDGNWGENTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTFDVEFEESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFFMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASSRLYKMFKGSEWKSISLRTATLFPATVCAVFFVLNALIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGGYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKFVSAVLYFGYMLIVSYAFFVVTGTIGFYACFWFTRLIYSSVKID 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03458 649 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 7 649 - -
Aip06g03458 649 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 7 649 IPR004240 GO:0016021
Aip06g03458 649 Pfam Endomembrane protein 70 87 606 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03458 Aip-Chr6 131714294 131717673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03458 11 649 Miscellaneous Gene Families AT5G10840 80.031 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03458 K17086 - gmx:100810506 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03458 06 131714294 131717673 Aip06g03458 06 131714294 131717673 ECH
Aip06g03458 06 131714294 131717673 Aip10g02460 10 110504437 110508416 PCT